RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 RAB32Q13637 225 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 HABP2Q14520 560 aaPredicted RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 OR7A5Q15622 319 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 HMGN3Q15651 99 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 SRSF7Q16629 238 aaKnown RBP eCLIP5.97□□□□□ -1.45
UBR4-212ENST00000475973 ATP1A1-AS1Q5TC04 95 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 TMEM42Q69YG0 159 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 EIF5AL1Q6IS14 154 aaKnown RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 KLHL24Q6TFL4 600 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 UNQ6126/PRO20091Q6UXV3 157 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 Q6ZS49 121 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 C1QL2Q7Z5L3 287 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 METTL27Q8N6F8 245 aaPredicted RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 C15orf54Q8N8G6 183 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 OR8G5Q8NG78 346 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 OR2M3Q8NG83 312 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 OR51E1Q8TCB6 317 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 TMED6Q8WW62 240 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 PP6455Q8WZ26 134 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 ROBO4Q8WZ75 1007 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 DCUN1D4Q92564 292 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 MR1Q95460 341 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 NABP1Q96AH0 204 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 ARHGAP5-AS1Q96IT6 56 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 CYYR1Q96J86 154 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 Q96M66 194 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 C5orf34Q96MH7 638 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 GINS3Q9BRX5 216 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 URM1Q9BTM9 101 aaKnown RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 TMEM59Q9BXS4 323 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 PECRQ9BY49 303 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 ANGPTL4Q9BY76 406 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 MRPL18Q9H0U6 180 aaKnown RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 OR10A2Q9H208 303 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 SMDT1Q9H4I9 107 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 PLEKHA2Q9HB19 425 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 SH2D2AQ9NP31 389 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 ZNF71Q9NQZ8 489 aaPredicted RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 ASF1BQ9NVP2 202 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 IL36GQ9NZH8 169 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 DHCR7Q9UBM7 475 aaKnown RBP5.97□□□□□ -1.45
UBR4-212ENST00000475973 COPS7AQ9UBW8 275 aa5.97□□□□□ -1.45
UBR4-212ENST00000475973 IGKV1D-8A0A087WSZ0 117 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 A0A1W2PP11 408 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 ZNF814B7Z6K7 855 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 JTBO76095 146 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 IGHG1P01857 330 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 ACAA1P09110 424 aaPredicted RBP5.96□□□□□ -1.46
UBR4-212ENST00000475973 WNT2P09544 360 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 DANCRP0C864 163 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 SPP1P10451 314 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 AKR1C4P17516 323 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 CRYGSP22914 178 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 GLRA1P23415 457 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 OR3A4PP47883 348 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 MEOX2P50222 304 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 ARHGDIBP52566 201 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 F2RL1P55085 397 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 BIDP55957 195 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 FBXW4P57775 412 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 AIMP2Q13155 320 aaKnown RBP5.96□□□□□ -1.46
UBR4-212ENST00000475973 MYBPHQ13203 477 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 ENDOGQ14249 297 aaKnown RBP5.96□□□□□ -1.46
UBR4-212ENST00000475973 TMEM187Q14656 261 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 DAZAP2Q15038 168 aaPredicted RBP5.96□□□□□ -1.46
UBR4-212ENST00000475973 KISS1Q15726 138 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 LRRC37A5PQ49AS3 106 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 AVPI1Q5T686 147 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 GPR157Q5UAW9 335 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 RPL7L1Q6DKI1 246 aaKnown RBP5.96□□□□□ -1.46
UBR4-212ENST00000475973 HAGHLQ6PII5 290 aaPredicted RBP5.96□□□□□ -1.46
UBR4-212ENST00000475973 OPN5Q6U736 354 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 LANCL3Q6ZV70 420 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 C1QL4Q86Z23 238 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 CBLN2Q8IUK8 224 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 ZNF100Q8IYN0 542 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 FAM71E2Q8N5Q1 922 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 CHST4Q8NCG5 386 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 OR51F2Q8NH61 342 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 LILRB1Q8NHL6 650 aaPredicted RBP5.96□□□□□ -1.46
UBR4-212ENST00000475973 STT3BQ8TCJ2 826 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 RXFP4Q8TDU9 374 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 THAP3Q8WTV1 239 aaPredicted RBP5.96□□□□□ -1.46
UBR4-212ENST00000475973 SFT2D1Q8WV19 159 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 HAS2Q92819 552 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 C18orf12Q96KH6 178 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 GAL3ST4Q96RP7 486 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 CHST5Q9GZS9 411 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 LIME1Q9H400 295 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 GPR84Q9NQS5 396 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 C1orf123Q9NWV4 160 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 TP53TG5Q9Y2B4 290 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 KPTNQ9Y664 436 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 ATMQ13315 3056 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 MGAQ8IWI9 3026 aa5.96□□□□□ -1.46
UBR4-212ENST00000475973 TDRD6O60522 2096 aaKnown RBP5.95□□□□□ -1.46
UBR4-212ENST00000475973 FASNP49327 2511 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms