RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 AKR1E2Q96JD6 320 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 SNX22Q96L94 193 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 CEP19Q96LK0 163 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 MNTQ99583 582 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 PRRG3Q9BZD7 231 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 PLEKHA1Q9HB21 404 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.71□□□□□ -1.02
CDRT1-205ENST00000475944 OR52A1Q9UKL2 312 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 SLC7A11Q9UPY5 501 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 HILPDAQ9Y5L2 63 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 R4GMQ9 66 aa8.71□□□□□ -1.02
CDRT1-205ENST00000475944 A0A1B0GTI1 187 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 FAM230AA0A1W2PPH8 454 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 A0A1W2PRX2 142 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 hADV38S2A0JD32 116 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 MEX3AA1L020 520 aaKnown RBP8.7□□□□□ -1.02
CDRT1-205ENST00000475944 A6NIN4 97 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 AQP12BA6NM10 295 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 ZNF670-ZNF695F2Z2N8 137 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 ZNF737O75373 536 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 MPIG6BO95866 241 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 PF4P02776 101 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 IGLL1P15814 213 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 PRKACGP22612 351 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 CXCR4P61073 352 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 SLC35A2P78381 396 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 CD83Q01151 205 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 IL18R1Q13478 541 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 EDDM3AQ14507 147 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 TMEM95Q3KNT9 176 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 VAX1Q5SQQ9 334 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 SLX4IPQ5VYV7 408 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 Q6ZS46 218 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 ZBTB49Q6ZSB9 765 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 Q6ZSR3 168 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 C16orf82Q7Z2V1 217 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 AQP12AQ8IXF9 295 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 SLC35F2Q8IXU6 374 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 ZNF676Q8N7Q3 588 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 CAPSLQ8WWF8 208 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 APOL4Q9BPW4 351 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 OCSTAMPQ9BR26 566 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDRT1-205ENST00000475944 H2AFY2Q9P0M6 372 aaPredicted RBP8.7□□□□□ -1.02
CDRT1-205ENST00000475944 SNX5Q9Y5X3 404 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 LINC00312Q9Y6C7 94 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 SESN1Q9Y6P5 492 aa8.7□□□□□ -1.02
CDRT1-205ENST00000475944 IGHV2-26A0A0B4J1V2 119 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 DUS4LO95620 317 aaKnown RBP8.69□□□□□ -1.02
CDRT1-205ENST00000475944 HTR1DP28221 377 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 PEX2P28328 305 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 ARHGDIBP52566 201 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 CRISP1P54107 249 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 CBX1P83916 185 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 PLEKHG7Q6ZR37 379 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 MEPCEQ7L2J0 689 aaKnown RBP8.69□□□□□ -1.02
CDRT1-205ENST00000475944 TCF23Q7RTU1 214 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 CENPVQ7Z7K6 275 aaPredicted RBP8.69□□□□□ -1.02
CDRT1-205ENST00000475944 SLAMF9Q96A28 289 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 RCC1LQ96I51 464 aaKnown RBP8.69□□□□□ -1.02
CDRT1-205ENST00000475944 CLEC7AQ9BXN2 247 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 CADM1Q9BY67 442 aaKnown RBP8.69□□□□□ -1.02
CDRT1-205ENST00000475944 TMEM133Q9H2Q1 129 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 SEBOXQ9HB31 216 aaPredicted RBP8.69□□□□□ -1.02
CDRT1-205ENST00000475944 PAPOLBQ9NRJ5 636 aaKnown RBP8.69□□□□□ -1.02
CDRT1-205ENST00000475944 MTCH1Q9NZJ7 389 aa8.69□□□□□ -1.02
CDRT1-205ENST00000475944 TSSC4Q9Y5U2 329 aaPredicted RBP8.69□□□□□ -1.02
CDRT1-205ENST00000475944 TCRBV4S1A1TA0A5B7 111 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 FAM90A22PA8MWA6 464 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 MAGEB4O15481 346 aaPredicted RBP8.68□□□□□ -1.02
CDRT1-205ENST00000475944 PRKYO43930 277 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 GATBO75879 557 aaKnown RBP8.68□□□□□ -1.02
CDRT1-205ENST00000475944 CLIC3O95833 236 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 HAND1O96004 215 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 JUNBP17275 347 aaPredicted RBP8.68□□□□□ -1.02
CDRT1-205ENST00000475944 CCL1P22362 96 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 GABRR1P24046 479 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 BRS3P32247 399 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 FUT6P51993 359 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 UBE2V2Q15819 145 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 GRK1Q15835 563 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 NXNL2Q5VZ03 156 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 SLC25A26Q70HW3 274 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 EGFL6Q8IUX8 553 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 Q8IYB0 196 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 ENTHD1Q8IYW4 607 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 CCDC54Q8NEL0 328 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 OR4X2Q8NGF9 303 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 EMG1Q92979 244 aaKnown RBP8.68□□□□□ -1.02
CDRT1-205ENST00000475944 BORCS8Q96FH0 119 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 THTPAQ9BU02 230 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 LIN7BQ9HAP6 207 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 ADGRL4Q9HBW9 690 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 CLN6Q9NWW5 311 aa8.68□□□□□ -1.02
CDRT1-205ENST00000475944 MRM2Q9UI43 246 aaKnown RBP8.68□□□□□ -1.02
CDRT1-205ENST00000475944 IGKV1-27A0A075B6S5 117 aa8.67□□□□□ -1.02
CDRT1-205ENST00000475944 TMEM82A0PJX8 343 aa8.67□□□□□ -1.02
CDRT1-205ENST00000475944 F8VVB4 439 aa8.67□□□□□ -1.02
CDRT1-205ENST00000475944 F8VWA3 439 aa8.67□□□□□ -1.02
CDRT1-205ENST00000475944 K7EIL1 84 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms