RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	COMP	P49747	757 aa	Predicted RBP	13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	CAPZA1	P52907	286 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	ACTG1	P63261	375 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	ASPHD2	Q6ICH7	369 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	C1orf122	Q6ZSJ8	110 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	LHFPL2	Q6ZUX7	228 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	CMTM4	Q8IZR5	234 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	PIP4P2	Q8N4L2	257 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	OR5AK2	Q8NH90	309 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	HAVCR2	Q8TDQ0	301 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	GGH	Q92820	318 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	SPSB1	Q96BD6	273 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	DCLRE1B	Q9H816	532 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	UNKL	Q9H9P5	680 aa	Known RBP	13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	ZMAT3	Q9HA38	289 aa	Known RBP	13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	RBFOX1	Q9NWB1	397 aa	Known RBP	13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	IL36RN	Q9UBH0	155 aa		13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.58	□□□□□ -0.24
VPS8-222	ENST00000475580	IGKV1-12	A0A0C4DH73	117 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	TRBV2	A0A0J9YWF9	115 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580		A0A1W2PQ09	198 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	IRGM	A1A4Y4	181 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580		M0R1W7	72 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	SPRY1	O43609	319 aa	Predicted RBP	13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	ZNF737	O75373	536 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	LALBA	P00709	142 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	IGKV1D-12	P01611	117 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	TK1	P04183	234 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	MTCP1	P56278	107 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	COL10A1	Q03692	680 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	PDZK1IP1	Q13113	114 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	KLRD1	Q13241	179 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	CDK5R1	Q15078	307 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	RPL22L1	Q6P5R6	122 aa	Known RBP	13.57	□□□□□ -0.24
VPS8-222	ENST00000475580		Q6YL49	198 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	FAM185A	Q8N0U4	392 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	PARP16	Q8N5Y8	322 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	ZNF485	Q8NCK3	441 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	NRG4	Q8WWG1	115 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	TFAP2C	Q92754	450 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	RFT1	Q96AA3	541 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	SPACA5	Q96QH8	159 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	COMMD4	Q9H0A8	199 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	ZCCHC4	Q9H5U6	513 aa		13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.57	□□□□□ -0.24
VPS8-222	ENST00000475580	TENM1	Q9UKZ4	2725 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580		A0A0U1RQK1	487 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580		K7N7A8	449 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	HOXA3	O43365	443 aa	Predicted RBP	13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	ANGPTL7	O43827	346 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	ALX3	O95076	343 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	MELTF	P08582	738 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	PIP	P12273	146 aa	Predicted RBP	13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	BCL3	P20749	454 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	SLC34A1	Q06495	639 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	CCDC58	Q4VC31	144 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	TMEM200B	Q69YZ2	307 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	HCP5	Q6MZN7	132 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	MKX	Q8IYA7	352 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	C11orf42	Q8N5U0	333 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	GCDH	Q92947	438 aa	Predicted RBP	13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	EMG1	Q92979	244 aa	Known RBP	13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	TMEM80	Q96HE8	168 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	FAM234A	Q9H0X4	552 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	SEBOX	Q9HB31	216 aa	Predicted RBP	13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	NOX4	Q9NPH5	578 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	DHDH	Q9UQ10	334 aa		13.56	□□□□□ -0.24
VPS8-222	ENST00000475580	DSCAML1	Q8TD84	2053 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	TMEM82	A0PJX8	343 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	OGG1	O15527	345 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	XPNPEP2	O43895	674 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	CHRM2	P08172	466 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	RPSA	P08865	295 aa	Known RBP	13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	HKR1	P10072	659 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	ZP1	P60852	638 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	RPL31	P62899	125 aa	Known RBP	13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	ST3GAL4	Q11206	333 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	DOC2B	Q14184	412 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	ZNF273	Q14593	569 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	ZNF529	Q6P280	563 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	TMPRSS11A	Q6ZMR5	421 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	SERPINA12	Q8IW75	414 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580		Q8IYB0	196 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	FAM58A	Q8N1B3	248 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	PNKD	Q8N490	385 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	OR4M1	Q8NGD0	313 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	OR5D18	Q8NGL1	313 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	TSEN15	Q8WW01	171 aa	Known RBP	13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	ZDHHC16	Q969W1	377 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	SLC25A28	Q96A46	364 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	METTL8	Q9H825	291 aa	Known RBP	13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	PLCXD1	Q9NUJ7	323 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	BABAM2	Q9NXR7	383 aa		13.55	□□□□□ -0.24
VPS8-222	ENST00000475580	SULT1B1	O43704	296 aa		13.54	□□□□□ -0.24
VPS8-222	ENST00000475580	KDM4B	O94953	1096 aa		13.54	□□□□□ -0.24
VPS8-222	ENST00000475580	HAND1	O96004	215 aa		13.54	□□□□□ -0.24
VPS8-222	ENST00000475580	CALCB	P10092	127 aa		13.54	□□□□□ -0.24
VPS8-222	ENST00000475580	MYL12A	P19105	171 aa		13.54	□□□□□ -0.24
VPS8-222	ENST00000475580	ZNF146	Q15072	292 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms