RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TMEM133Q9H2Q1 129 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 MAGIXQ9H6Y5 334 aa16.33■□□□□ 0.2
VPS36-203ENST00000475375 NUFIP1Q9UHK0 495 aaKnown RBP16.33■□□□□ 0.2
VPS36-203ENST00000475375 DLGAP1O14490 977 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 ZNF737O75373 536 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 IGLV3-1P01715 115 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 HMGN1P05114 100 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 MPZP25189 248 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 ARHGDIBP52566 201 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 RIDAP52758 137 aaKnown RBP16.32■□□□□ 0.2
VPS36-203ENST00000475375 ERVK11-1P61568 191 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 MFGE8Q08431 387 aaPredicted RBP16.32■□□□□ 0.2
VPS36-203ENST00000475375 APOFQ13790 326 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 TCF23Q7RTU1 214 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 MRPL41Q8IXM3 137 aaKnown RBP16.32■□□□□ 0.2
VPS36-203ENST00000475375 TPRX1Q8N7U7 411 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 FAM107BQ9H098 131 aa16.32■□□□□ 0.2
VPS36-203ENST00000475375 FAM230AA0A1W2PPH8 454 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 ZNF254O75437 659 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 TTRP02766 147 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 IL24Q13007 206 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 SPATS1Q496A3 300 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 FAM98BQ52LJ0 330 aaKnown RBP16.31■□□□□ 0.2
VPS36-203ENST00000475375 TRAPPC6BQ86SZ2 158 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 ZNF679Q8IYX0 411 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 SNX22Q96L94 193 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 NDE1Q9NXR1 346 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 LINC00312Q9Y6C7 94 aa16.31■□□□□ 0.2
VPS36-203ENST00000475375 TCRBV5S2A0A599 114 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 LOC110117498-PIK3R3F6TDL0 507 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 SLC2A5P22732 501 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 GABRR1P24046 479 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 GRK1Q15835 563 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 BCL2L15Q5TBC7 163 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 TMEM42Q69YG0 159 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 UNQ9370/PRO34162Q6UXP9 181 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 OR4P4Q8NGL7 312 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 ASB17Q8WXJ9 295 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 CEP19Q96LK0 163 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 MCRIP2Q9BUT9 160 aaKnown RBP16.3■□□□□ 0.2
VPS36-203ENST00000475375 PKIBQ9C010 78 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 CHST6Q9GZX3 395 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 DPM3Q9P2X0 92 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 TAGLN3Q9UI15 199 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 U3KQK5 164 aa16.3■□□□□ 0.2
VPS36-203ENST00000475375 TMEM82A0PJX8 343 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 PRR32B1ATL7 298 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 F8VVB4 439 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 F8VWA3 439 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 OR2F2O95006 317 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 PEX2P28328 305 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 ROM1Q03395 351 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 HSP90B2PQ58FF3 399 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 SLX4IPQ5VYV7 408 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 ABHD12Q8N2K0 398 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 SLAMF9Q96A28 289 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 RBM14Q96PK6 669 aaKnown RBP16.29■□□□□ 0.2
VPS36-203ENST00000475375 TEX12Q9BXU0 123 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 SLC7A11Q9UPY5 501 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 TMEM14AQ9Y6G1 99 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 V9GYS6 101 aa16.29■□□□□ 0.2
VPS36-203ENST00000475375 PSMB11A5LHX3 300 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 NUDT19A8MXV4 375 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 IGHA1P01876 353 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 NHLRC4P0CG21 123 aaPredicted RBP16.28■□□□□ 0.2
VPS36-203ENST00000475375 ETV3LQ6ZN32 361 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 DHFR2Q86XF0 187 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 EGFL6Q8IUX8 553 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 OSR2Q8N2R0 312 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 CADM1Q9BY67 442 aaKnown RBP16.28■□□□□ 0.2
VPS36-203ENST00000475375 PAPOLBQ9NRJ5 636 aaKnown RBP16.28■□□□□ 0.2
VPS36-203ENST00000475375 ARL8BQ9NVJ2 186 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 MTCH1Q9NZJ7 389 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 DNAJB9Q9UBS3 223 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 ZMAT5Q9UDW3 170 aaKnown RBP16.28■□□□□ 0.2
VPS36-203ENST00000475375 COPS3Q9UNS2 423 aa16.28■□□□□ 0.2
VPS36-203ENST00000475375 MMP23AO75900 390 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 HAND1O96004 215 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 CST1P01037 141 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 LMO1P25800 156 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 DGCR2P98153 550 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 SNAPC1Q16533 368 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 PRAMEF5Q5TYX0 476 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 ZNF329Q86UD4 541 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 OR14K1Q8NGZ2 314 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 ZNF596Q8TC21 504 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 TFAP2CQ92754 450 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 EMG1Q92979 244 aaKnown RBP16.27■□□□□ 0.2
VPS36-203ENST00000475375 APOL4Q9BPW4 351 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 MOB1AQ9H8S9 216 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 ZNF556Q9HAH1 456 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 PLEKHA1Q9HB21 404 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 PCDHGB5Q9Y5G0 923 aa16.27■□□□□ 0.2
VPS36-203ENST00000475375 DSCAML1Q8TD84 2053 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 FAM172BPA6NC97 362 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 ARRDC5A6NEK1 342 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 LEUTXA8MZ59 168 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 GNGT2O14610 69 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 OSMP13725 252 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 THBS3P49746 956 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms