RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PRODHO43272 600 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 NRASP01111 189 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 MRPL3P09001 348 aaKnown RBP11.26□□□□□ -0.61
CCDC78-209ENST00000474647 OSMP13725 252 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 OR12D2P58182 307 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 ESRRGP62508 458 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 DEFB121Q5J5C9 76 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 KHDC1LQ5JSQ8 128 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 BBS1Q8NFJ9 593 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 OR5AU1Q8NGC0 362 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 OR8B4Q96RC9 309 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 SLC29A1Q99808 456 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 PBOV1Q9GZY1 135 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 GPR173Q9NS66 373 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 ENOPH1Q9UHY7 261 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 POLDIP2Q9Y2S7 368 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 HILPDAQ9Y5L2 63 aa11.26□□□□□ -0.61
CCDC78-209ENST00000474647 TENM3Q9P273 2699 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 C17orf98A8MV24 154 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 MITFO75030 526 aaPredicted RBP11.25□□□□□ -0.61
CCDC78-209ENST00000474647 VSIG8P0DPA2 414 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 DLX6P56179 175 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 SLC35A2P78381 396 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 GINS1Q14691 196 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 LRRC36Q1X8D7 754 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 ZNF626Q68DY1 528 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 KCTD18Q6PI47 426 aaPredicted RBP11.25□□□□□ -0.61
CCDC78-209ENST00000474647 ZNF573Q86YE8 665 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 CPOQ8IVL8 374 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 NRG4Q8WWG1 115 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 TEAD3Q99594 435 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 GABARAPL3Q9BY60 117 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 MROQ9BYG7 248 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 ORC6Q9Y5N6 252 aa11.25□□□□□ -0.61
CCDC78-209ENST00000474647 DHRS3O75911 302 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 ZNF728P0DKX0 622 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 IGHV1-8P0DP01 117 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 ATP6V1B1P15313 513 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 ALOX5APP20292 161 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 COL10A1Q03692 680 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 MFGE8Q08431 387 aaPredicted RBP11.24□□□□□ -0.61
CCDC78-209ENST00000474647 APOFQ13790 326 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 EDDM3AQ14507 147 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 ZNF829Q3KNS6 432 aaPredicted RBP11.24□□□□□ -0.61
CCDC78-209ENST00000474647 GDPD3Q7L5L3 318 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
CCDC78-209ENST00000474647 NDNFQ8TB73 568 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 RDH12Q96NR8 316 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 NRIP2Q9BQI9 281 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 VCXQ9H320 206 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 VCX3BQ9H321 246 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 IKZF2Q9UKS7 526 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 SLC22A13Q9Y226 551 aa11.24□□□□□ -0.61
CCDC78-209ENST00000474647 TCRBV4S1A1TA0A5B7 111 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 A6NIN4 97 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 ACOD1A6NK06 481 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 CRISP1P54107 249 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 ACTA2P62736 377 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 ACTG2P63267 376 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 ACTC1P68032 377 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 ACTA1P68133 377 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 CD83Q01151 205 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 CD69Q07108 199 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 SLC35D3Q5M8T2 416 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 KRT74Q7RTS7 529 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 ZNF676Q8N7Q3 588 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 WFDC9Q8NEX5 89 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 OR11H6Q8NGC7 330 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 TRMT10AQ8TBZ6 339 aaKnown RBP11.23□□□□□ -0.61
CCDC78-209ENST00000474647 ZNF714Q96N38 554 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 SLC25A19Q9HC21 320 aa11.23□□□□□ -0.61
CCDC78-209ENST00000474647 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC78-209ENST00000474647 WI2-2373I1.2A0A1W2PRP0 233 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 PQLC2LA1A4F0 135 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 PRR32B1ATL7 298 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 E9PQ18 207 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 K7N7A8 449 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 DLGAP1O14490 977 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 NOS1APO75052 506 aaPredicted RBP11.22□□□□□ -0.61
CCDC78-209ENST00000474647 INMTO95050 263 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 IGLV3-1P01715 115 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 RBP4P02753 201 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 HMGN1P05114 100 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 SLC2A5P22732 501 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 AZGP1P25311 298 aaKnown RBP11.22□□□□□ -0.61
CCDC78-209ENST00000474647 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
CCDC78-209ENST00000474647 RIDAP52758 137 aaKnown RBP11.22□□□□□ -0.61
CCDC78-209ENST00000474647 KRTAP10-11P60412 298 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 CLVS2Q5SYC1 327 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 ANGPTL5Q86XS5 388 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 CAPSLQ8WWF8 208 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 RCC1LQ96I51 464 aaKnown RBP11.22□□□□□ -0.61
CCDC78-209ENST00000474647 MBOAT4Q96T53 435 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 OCSTAMPQ9BR26 566 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 YIPF3Q9GZM5 350 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 RIBC2Q9H4K1 309 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 HES4Q9HCC6 221 aa11.22□□□□□ -0.61
CCDC78-209ENST00000474647 SMPD3Q9NY59 655 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms