RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 BRD3OSQ6XYD6 125 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 ASCC1Q8N9N2 400 aaKnown RBP11.74□□□□□ -0.53
VAMP4-203ENST00000474047 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 DMRTB1Q96MA1 342 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 SPACA5Q96QH8 159 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 ELL3Q9HB65 397 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-203ENST00000474047 HES4Q9HCC6 221 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 SCN3BQ9NY72 215 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 GLS2Q9UI32 602 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 PSORS1C1Q9UIG5 152 aa11.74□□□□□ -0.53
VAMP4-203ENST00000474047 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 SPRY1O43609 319 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-203ENST00000474047 CHRM2P08172 466 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 RAB3AP20336 220 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 PDZK1IP1Q13113 114 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 BAMBIQ13145 260 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 XAF1Q6GPH4 301 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 VMO1Q7Z5L0 202 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 SATL1Q86VE3 508 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 CPNE2Q96FN4 548 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-203ENST00000474047 TBX15Q96SF7 602 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 GPER1Q99527 375 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 ERGIC3Q9Y282 383 aa11.73□□□□□ -0.53
VAMP4-203ENST00000474047 TRBV23-1A0A0A0MS06 115 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 PTGES3LE9PB15 166 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 SULT1B1O43704 296 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 MT-ND2P03891 347 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 TMEM225BP0DP42 221 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 MMP9P14780 707 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 BCL3P20749 454 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 PDZD9Q8IXQ8 264 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 FAM58AQ8N1B3 248 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 PARP16Q8N5Y8 322 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 KIR3DL3Q8N743 410 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 OR5D18Q8NGL1 313 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 C8orf46Q8TAG6 207 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 FBLIM1Q8WUP2 373 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 ZFAND2BQ8WV99 257 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 MYDGFQ969H8 173 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 SMIM19Q96E16 107 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 ZNF281Q9Y2X9 895 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 PCDHGB5Q9Y5G0 923 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 COL6A5A8TX70 2615 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 CENPVL3A0A0U1RRI6 287 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 F8VVB4 439 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 F8VWA3 439 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 OGG1O15527 345 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 ANGPTL7O43827 346 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 PRKACAP17612 351 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
VAMP4-203ENST00000474047 TAS2R43P59537 309 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 RPL31P62899 125 aaKnown RBP11.72□□□□□ -0.53
VAMP4-203ENST00000474047 PPP3R1P63098 170 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 ACTG1P63261 375 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 COL10A1Q03692 680 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 C6orf141Q5SZD1 244 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 RUSC1-AS1Q66K80 236 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 ZFP41Q8N8Y5 198 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 ZSCAN4Q8NAM6 433 aaPredicted RBP11.72□□□□□ -0.53
VAMP4-203ENST00000474047 TBC1D15Q8TC07 691 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 GHSRQ92847 366 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 TMEM106AQ96A25 262 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 FAM234AQ9H0X4 552 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 SIRT7Q9NRC8 400 aa11.72□□□□□ -0.53
VAMP4-203ENST00000474047 RBFOX1Q9NWB1 397 aaKnown RBP11.72□□□□□ -0.53
VAMP4-203ENST00000474047 FBN1P35555 2871 aaKnown RBP11.72□□□□□ -0.53
VAMP4-203ENST00000474047 IGHV1-69DA0A0B4J2H0 117 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 PNMA8CA0A1B0GUJ8 204 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 ALX3O95076 343 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 IGHV1-69P01742 117 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 TK1P04183 234 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 CALCBP10092 127 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 EEF1B2P24534 225 aaKnown RBP11.71□□□□□ -0.54
VAMP4-203ENST00000474047 C21orf33P30042 268 aaPredicted RBP11.71□□□□□ -0.54
VAMP4-203ENST00000474047 NPBWR2P48146 333 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 HSPA13P48723 471 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 WNT4P56705 351 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 KISS1Q15726 138 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 LAIR2Q6ISS4 152 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 C9orf139Q6ZV77 190 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 GDPD3Q7L5L3 318 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 OR4M1Q8NGD0 313 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 OR5D13Q8NGL4 314 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 DUX5Q96PT3 197 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 TAS2R4Q9NYW5 299 aa11.71□□□□□ -0.54
VAMP4-203ENST00000474047 SOX21Q9Y651 276 aaPredicted RBP11.71□□□□□ -0.54
VAMP4-203ENST00000474047 SIRT4Q9Y6E7 314 aaPredicted RBP11.71□□□□□ -0.54
VAMP4-203ENST00000474047 hCG_1809904A0A1W2PP81 198 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 A0A1W2PR64 198 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 A0A1W2PRV1 198 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 M0R1W7 72 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 SH2D1BO14796 132 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 HAND1O96004 215 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 GABRR1P24046 479 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 DUSP1P28562 367 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms