RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SAXO1Q8IYX7 474 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 FAM58AQ8N1B3 248 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 FAM216BQ8N7L0 139 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 ZSCAN4Q8NAM6 433 aaPredicted RBP10.33□□□□□ -0.76
DDX56-209ENST00000473924 TNFAIP8L1Q8WVP5 186 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 ST8SIA4Q92187 359 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 S100A13Q99584 98 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 SHARPINQ9H0F6 387 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 ELL3Q9HB65 397 aaPredicted RBP10.33□□□□□ -0.76
DDX56-209ENST00000473924 HES4Q9HCC6 221 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 RBFOX1Q9NWB1 397 aaKnown RBP10.33□□□□□ -0.76
DDX56-209ENST00000473924 HIVEP2P31629 2446 aa10.33□□□□□ -0.76
DDX56-209ENST00000473924 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.766e-10■■□□□ 13.2
DDX56-209ENST00000473924 MALRD1Q5VYJ5 2156 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 LOC105371242A0A075B767 164 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 PPIAL4CA0A0B4J2A2 164 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 A0A1B0GW55 424 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 F8VVB4 439 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 F8VWA3 439 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 GABRPO00591 440 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 SIGLEC5O15389 551 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 PIN1P1O15428 100 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 RGS9O75916 674 aaPredicted RBP10.32□□□□□ -0.76
DDX56-209ENST00000473924 DUX4L2P0CJ85 424 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 DUX4L3P0CJ86 424 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 DUX4L4P0CJ87 422 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 DUX4L5P0CJ88 424 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 DUX4L6P0CJ89 424 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 DUX4L7P0CJ90 424 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 CALCBP10092 127 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 NDUFB7P17568 137 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 PRKACAP17612 351 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 AMY2BP19961 511 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 CEBPDP49716 269 aaPredicted RBP10.32□□□□□ -0.76
DDX56-209ENST00000473924 CAPZA1P52907 286 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 SNU13P55769 128 aaKnown RBP10.32□□□□□ -0.76
DDX56-209ENST00000473924 ZP1P60852 638 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 HSD17B12Q53GQ0 312 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 FAM120AOSQ5T036 256 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 FAM27D1Q5T7N8 215 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 UBE2UQ5VVX9 321 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 DUX4L9Q6RFH8 374 aaPredicted RBP10.32□□□□□ -0.76
DDX56-209ENST00000473924 JAGN1Q8N5M9 183 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 TMEM185AQ8NFB2 350 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 GAFA1Q96PS6 74 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 NKX3-1Q99801 234 aaPredicted RBP10.32□□□□□ -0.76
DDX56-209ENST00000473924 BEX2Q9BXY8 128 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 SLITRK2Q9H156 845 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 MMP26Q9NRE1 261 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 TMEM160Q9NX00 188 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 DUX4Q9UBX2 424 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 SLC25A10Q9UBX3 287 aaPredicted RBP10.32□□□□□ -0.76
DDX56-209ENST00000473924 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 CDC42EP3Q9UKI2 254 aa10.32□□□□□ -0.76
DDX56-209ENST00000473924 POLR3KQ9Y2Y1 108 aaPredicted RBP10.32□□□□□ -0.76
DDX56-209ENST00000473924 IGHV2-70DA0A0C4DH43 119 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 IGKV1-12A0A0C4DH73 117 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 MEGF11A6BM72 1044 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 MAGEA13PA6NCF6 341 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 J3QLI3 93 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 CCRL2O00421 344 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 GPR37O15354 613 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 SC5DO75845 299 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 ARL6IP5O75915 188 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 KDM4BO94953 1096 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 ECDO95905 644 aaPredicted RBP10.31□□□□□ -0.76
DDX56-209ENST00000473924 IGKV1D-12P01611 117 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 SELLP14151 372 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 SRMP19623 302 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 PTGFRP43088 359 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 OR3A4PP47883 348 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 RSU1Q15404 277 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 NEDD8Q15843 81 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 SSX1Q16384 188 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 DGUOKQ16854 277 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 CHRFAM7AQ494W8 412 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 CRIP3Q6Q6R5 217 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 IL17RELQ6ZVW7 336 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 BTN2A1Q7KYR7 527 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 ZNF561Q8N587 486 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 CD177Q8N6Q3 437 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 NKAIN3Q8N8D7 197 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 ZNRF1Q8ND25 227 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 PXT1Q8NFP0 134 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 TSPAN14Q8NG11 270 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 RAB40AQ8WXH6 277 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 H1FXQ92522 213 aaKnown RBP10.31□□□□□ -0.76
DDX56-209ENST00000473924 SDSLQ96GA7 329 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 NUDT16L1Q9BRJ7 211 aaKnown RBP10.31□□□□□ -0.76
DDX56-209ENST00000473924 MRI1Q9BV20 369 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 C7orf69Q9H7B7 122 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 VCX3AQ9NNX9 186 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 HMG20AQ9NP66 347 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 NDUFB11Q9NX14 153 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 LPAR3Q9UBY5 353 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 ZNF222Q9UK12 451 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 ING4Q9UNL4 249 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 GSTK1Q9Y2Q3 226 aa10.31□□□□□ -0.76
DDX56-209ENST00000473924 SF3B6Q9Y3B4 125 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms