RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 CYB5AP00167 134 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 MT-ND2P03891 347 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 RNASE1P07998 156 aaKnown RBP10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 OCM2P0CE71 109 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 OCMP0CE72 109 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 LIMS3P0CW19 117 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 LIMS4P0CW20 117 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 ATF1P18846 271 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 AZGP1P25311 298 aaKnown RBP10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 MED21Q13503 144 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 BLMHQ13867 455 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 CCDC58Q4VC31 144 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 TMPRSS11AQ6ZMR5 421 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 SLC25A26Q70HW3 274 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 VMO1Q7Z5L0 202 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 MKXQ8IYA7 352 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 CD177Q8N6Q3 437 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 OR51A4Q8NGJ6 313 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 OR5AK2Q8NH90 309 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 CNIH3Q8TBE1 160 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 TBC1D15Q8TC07 691 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 LHX4Q969G2 390 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 SLC25A28Q96A46 364 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 OPALINQ96PE5 141 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 SLITRK2Q9H156 845 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 SEBOXQ9HB31 216 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 MTCH1Q9NZJ7 389 aa10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 DIMT1Q9UNQ2 313 aaKnown RBP10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 CAB39Q9Y376 341 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-204ENST00000473602 A0A1W2PPH5 198 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 A0A1W2PQ09 198 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 ALX3O95076 343 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 TFF1P04155 84 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 MYL12AP19105 171 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 CAPGP40121 348 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 CAPZA1P52907 286 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 MTCP1P56278 107 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 DEFB112Q30KQ8 113 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 NCR3LG1Q68D85 454 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 FIP1L1Q6UN15 594 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 C8orf59Q8N0T1 100 aaPredicted RBP10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 PARP16Q8N5Y8 322 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 OR10AC1Q8NH08 325 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 ZDHHC16Q969W1 377 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 METTL8Q9H825 291 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 EXOSC1Q9Y3B2 195 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 DSCAML1Q8TD84 2053 aa10.64□□□□□ -0.71
SHROOM3-204ENST00000473602 WNK1Q9H4A3 2382 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 TRBV2A0A0J9YWF9 115 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 ANKRD65E5RJM6 399 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 E9PI62 339 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 TK1P04183 234 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 CHRM2P08172 466 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 PIPP12273 146 aaPredicted RBP10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 MDKP21741 143 aaPredicted RBP10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 SLC9A3R2Q15599 337 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 RPL22L1Q6P5R6 122 aaKnown RBP10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 Q6YL49 198 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 SERPINA12Q8IW75 414 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 TMEM86BQ8N661 226 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 Q8N7P7 452 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 OR5D14Q8NGL3 314 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 OR5D13Q8NGL4 314 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 OR13C9Q8NGT0 318 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 RPS4Y2Q8TD47 263 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 SLAMF9Q96A28 289 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 CPNE2Q96FN4 548 aaPredicted RBP10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 TMEM80Q96HE8 168 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 PDCD1LG2Q9BQ51 273 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 ZCCHC4Q9H5U6 513 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 ELL3Q9HB65 397 aaPredicted RBP10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 RHOFQ9HBH0 211 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 SIRT7Q9NRC8 400 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 CHCHD3Q9NX63 227 aaKnown RBP10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 OR14J1Q9UGF5 321 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 DHDHQ9UQ10 334 aa10.63□□□□□ -0.71
SHROOM3-204ENST00000473602 MDFIC2A0A1B0GVS7 189 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 EFCAB10A6NFE3 127 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 K7N7A8 449 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 SULT1B1O43704 296 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 OMGP23515 440 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 EEF1B2P24534 225 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 POU3F4P49335 361 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 CEBPDP49716 269 aaPredicted RBP10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 ETV1P50549 477 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 RPL31P62899 125 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 PDZK1IP1Q13113 114 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 CDK5R1Q15078 307 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 SPIN3Q5JUX0 258 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 SAXO1Q8IYX7 474 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 FAM185AQ8N0U4 392 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 FAM58AQ8N1B3 248 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 BATF2Q8N1L9 274 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 OR52N1Q8NH53 320 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 GPR148Q8TDV2 347 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 FBLIM1Q8WUP2 373 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 TSEN15Q8WW01 171 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 TNFRSF14Q92956 283 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 EMG1Q92979 244 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms