RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 THAP6Q8TBB0 222 aa12.97□□□□□ -0.33
UBXN11-213ENST00000472155 TOMM40LQ969M1 308 aa12.97□□□□□ -0.33
UBXN11-213ENST00000472155 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
UBXN11-213ENST00000472155 GSKIPQ9P0R6 139 aa12.97□□□□□ -0.33
UBXN11-213ENST00000472155 B4GALT7Q9UBV7 327 aa12.97□□□□□ -0.33
UBXN11-213ENST00000472155 ANXA10Q9UJ72 324 aa12.97□□□□□ -0.33
UBXN11-213ENST00000472155 STARD10Q9Y365 291 aa12.97□□□□□ -0.33
UBXN11-213ENST00000472155 TNRC6AQ8NDV7 1962 aaKnown RBP12.97□□□□□ -0.33
UBXN11-213ENST00000472155 BCL2L11O43521 198 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 PRKACBP22694 351 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 NOVA1P51513 510 aaKnown RBP12.96□□□□□ -0.33
UBXN11-213ENST00000472155 TAS2R31P59538 309 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 AIMP2Q13155 320 aaKnown RBP12.96□□□□□ -0.33
UBXN11-213ENST00000472155 LHFPL2Q6ZUX7 228 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 TMEM17Q86X19 198 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 OSR2Q8N2R0 312 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 ZNF611Q8N823 705 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 MDS2Q8NDY4 140 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 PAPOLGQ9BWT3 736 aaKnown RBP12.96□□□□□ -0.33
UBXN11-213ENST00000472155 KANTRA0A1W2PQU2 76 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 OR5H8P0DN80 308 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 GPM6AP51674 278 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 FXYD4P59646 89 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 RAB32Q13637 225 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 ASCL4Q6XD76 172 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 COLCA1Q6ZS62 124 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 HPSE2Q8WWQ2 592 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 ASB13Q8WXK3 278 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 METTL8Q9H825 291 aaKnown RBP12.96□□□□□ -0.33
UBXN11-213ENST00000472155 TMEM9BQ9NQ34 198 aa12.96□□□□□ -0.33
UBXN11-213ENST00000472155 A0A0D9SG52 128 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 A0A1W2PR80 420 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 OR2F2O95006 317 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 SYNGR4O95473 234 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 DUSP1P28562 367 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 RAB1AP62820 205 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 OR2F1Q13607 317 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 LOXL4Q96JB6 756 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 SPRR3Q9UBC9 169 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 A0A0B4J2A0 478 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 F5H0A9 414 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-213ENST00000472155 HSPB6O14558 160 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 NME2P1O60361 137 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 BCL3P20749 454 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 NME2P22392 152 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 FUT6P51993 359 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 ELP2Q6IA86 826 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 SLC22A25Q6T423 547 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 SPSB4Q96A44 273 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF552Q9H707 407 aaPredicted RBP12.95□□□□□ -0.34
UBXN11-213ENST00000472155 SHPKQ9UHJ6 478 aa12.95□□□□□ -0.34
UBXN11-213ENST00000472155 OR7C1O76099 320 aaPredicted RBP12.94□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF345Q14585 488 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 FAM189A2Q15884 450 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 MYPOPQ86VE0 399 aaPredicted RBP12.94□□□□□ -0.34
UBXN11-213ENST00000472155 PDZD9Q8IXQ8 264 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 SUN5Q8TC36 379 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 APH1AQ96BI3 265 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF488Q96MN9 340 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 PRDM14Q9GZV8 571 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 RASL12Q9NYN1 266 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 RP1L1Q8IWN7 2480 aaPredicted RBP12.94□□□□□ -0.34
UBXN11-213ENST00000472155 GVINP1Q7Z2Y8 2422 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF806P0C7X5 589 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 TRIP6Q15654 476 aaKnown RBP12.94□□□□□ -0.34
UBXN11-213ENST00000472155 SPATA46Q5T0L3 261 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 SLC38A6Q8IZM9 456 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 OR11L1Q8NGX0 322 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 GPHA2Q96T91 129 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 REPIN1Q9BWE0 567 aaKnown RBP12.94□□□□□ -0.34
UBXN11-213ENST00000472155 BARX1Q9HBU1 254 aaPredicted RBP12.94□□□□□ -0.34
UBXN11-213ENST00000472155 ABI3Q9P2A4 366 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 SLC7A11Q9UPY5 501 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 DMXL2Q8TDJ6 3036 aa12.94□□□□□ -0.34
UBXN11-213ENST00000472155 SPAARA0A1B0GVQ0 90 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 TUBAL3A6NHL2 446 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 NKX2-8O15522 239 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 HAAOP46952 286 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 ARHGDIBP52566 201 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 UBA52P62987 128 aaKnown RBP12.93□□□□□ -0.34
UBXN11-213ENST00000472155 PRDX4Q13162 271 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 RBM39Q14498 530 aaKnown RBP12.93□□□□□ -0.34
UBXN11-213ENST00000472155 PHLDA2Q53GA4 152 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 ZNF100Q8IYN0 542 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 INO80EQ8NBZ0 244 aaPredicted RBP12.93□□□□□ -0.34
UBXN11-213ENST00000472155 LINC00470Q9BZP3 86 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 NMES1Q9C002 83 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 BCO1Q9HAY6 547 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 GTF3C1Q12789 2109 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 XRCC2O43543 280 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 IL18BPO95998 194 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 WT1P19544 449 aaPredicted RBP12.93□□□□□ -0.34
UBXN11-213ENST00000472155 WNT5AP41221 380 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 RBM11P57052 281 aaKnown RBP12.93□□□□□ -0.34
UBXN11-213ENST00000472155 S100A10P60903 97 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 IGSF11Q5DX21 431 aa12.93□□□□□ -0.34
UBXN11-213ENST00000472155 POC1AQ8NBT0 407 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms