RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 CAB39Q9Y376 341 aaPredicted RBP12.41□□□□□ -0.42
CALD1-215ENST00000472096 EXOSC1Q9Y3B2 195 aaKnown RBP12.41□□□□□ -0.42
CALD1-215ENST00000472096 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
CALD1-215ENST00000472096 CENPVL3A0A0U1RRI6 287 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 DNAJC9-AS1A6NH13 148 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 KNG1P01042 644 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 MYL12AP19105 171 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 PRKACBP22694 351 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 GTF2A1P52655 376 aaPredicted RBP12.4□□□□□ -0.42
CALD1-215ENST00000472096 ATP1B3P54709 279 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 UBA52P62987 128 aaKnown RBP12.4□□□□□ -0.42
CALD1-215ENST00000472096 SLC34A1Q06495 639 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 PDCD1Q15116 288 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 XAF1Q6GPH4 301 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 LAIR2Q6ISS4 152 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 LHFPL2Q6ZUX7 228 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 SLC25A26Q70HW3 274 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 VMO1Q7Z5L0 202 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 ZNF561Q8N587 486 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 OR13C9Q8NGT0 318 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 RPS4Y2Q8TD47 263 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 FAM216AQ8WUB2 273 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 FBLIM1Q8WUP2 373 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 SLAMF9Q96A28 289 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 C1orf147Q96MC9 270 aaPredicted RBP12.4□□□□□ -0.42
CALD1-215ENST00000472096 OR14J1Q9UGF5 321 aa12.4□□□□□ -0.42
CALD1-215ENST00000472096 TRBV23-1A0A0A0MS06 115 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 TRBV2A0A0J9YWF9 115 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 MDFIC2A0A1B0GVS7 189 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 A0A1W2PQ09 198 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 F8VVB4 439 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 F8VWA3 439 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 SLC1A7O00341 560 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 RPSAP08865 295 aaKnown RBP12.39□□□□□ -0.43
CALD1-215ENST00000472096 PIPP12273 146 aaPredicted RBP12.39□□□□□ -0.43
CALD1-215ENST00000472096 PRDX2P32119 198 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 POU3F4P49335 361 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 CAPZA1P52907 286 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 MTCP1P56278 107 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 BPIFB3P59826 476 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 CDK5R1Q15078 307 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 RPL22L1Q6P5R6 122 aaKnown RBP12.39□□□□□ -0.43
CALD1-215ENST00000472096 TMPRSS11AQ6ZMR5 421 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 CMTM4Q8IZR5 234 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 TSEN15Q8WW01 171 aaKnown RBP12.39□□□□□ -0.43
CALD1-215ENST00000472096 RGP1Q92546 391 aaPredicted RBP12.39□□□□□ -0.43
CALD1-215ENST00000472096 GGHQ92820 318 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 LHX4Q969G2 390 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 TMEM80Q96HE8 168 aa12.39□□□□□ -0.43
CALD1-215ENST00000472096 IGHV1-69DA0A0B4J2H0 117 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 XPNPEP2O43895 674 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 INMTO95050 263 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 IGHV1-69P01742 117 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 MT-ND2P03891 347 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 OCM2P0CE71 109 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 OCMP0CE72 109 aaPredicted RBP12.38□□□□□ -0.43
CALD1-215ENST00000472096 ACTG1P63261 375 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 MED21Q13503 144 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 CCDC58Q4VC31 144 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 Q8IYB0 196 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 PARP16Q8N5Y8 322 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 Q8N7P7 452 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 OR52N1Q8NH53 320 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 NRG4Q8WWG1 115 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 GATAD2BQ8WXI9 593 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 TFAP2CQ92754 450 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
CALD1-215ENST00000472096 RFT1Q96AA3 541 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 DUX5Q96PT3 197 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 ZCCHC4Q9H5U6 513 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 ZMAT3Q9HA38 289 aaKnown RBP12.38□□□□□ -0.43
CALD1-215ENST00000472096 SIRT7Q9NRC8 400 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 CNOT2Q9NZN8 540 aaKnown RBP12.38□□□□□ -0.43
CALD1-215ENST00000472096 CLEC2DQ9UHP7 191 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 DHDHQ9UQ10 334 aa12.38□□□□□ -0.43
CALD1-215ENST00000472096 EFCAB10A6NFE3 127 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 M0R1W7 72 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 SPRY1O43609 319 aaPredicted RBP12.37□□□□□ -0.43
CALD1-215ENST00000472096 CYB5AP00167 134 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 LALBAP00709 142 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 BCL3P20749 454 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 PRTN3P24158 256 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 AQP4P55087 323 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 ST3GAL4Q11206 333 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 BAMBIQ13145 260 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 CRIP3Q6Q6R5 217 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 METAP1DQ6UB28 335 aaPredicted RBP12.37□□□□□ -0.43
CALD1-215ENST00000472096 RNF144BQ7Z419 303 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 MKXQ8IYA7 352 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 FAM185AQ8N0U4 392 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 SMIM19Q96E16 107 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 SPACA5Q96QH8 159 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 PRDM13Q9H4Q3 707 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 C19orf12Q9NSK7 152 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 RBFOX1Q9NWB1 397 aaKnown RBP12.37□□□□□ -0.43
CALD1-215ENST00000472096 IL36RNQ9UBH0 155 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 PSORS1C1Q9UIG5 152 aa12.37□□□□□ -0.43
CALD1-215ENST00000472096 SIRT4Q9Y6E7 314 aaPredicted RBP12.37□□□□□ -0.43
CALD1-215ENST00000472096 ANK2Q01484 3957 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms