RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CLMPQ9H6B4 373 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 ARMC7Q9H6L4 198 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 TMEM27Q9HBJ8 222 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 NMRAL1Q9HBL8 299 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 AGPAT4Q9NRZ5 378 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 GLTPQ9NZD2 209 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 GALPQ9UBC7 116 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 FBXO5Q9UKT4 447 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 CHD5Q8TDI0 1954 aa2.4□□□□□ -2.03
CD46-213ENST00000471987 A0A1B0GUS0 222 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 PRORSD1PA6NEY8 169 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 SMIM9A6NGZ8 99 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 EFCAB9A8MZ26 197 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 PPP5D1E7EU14 171 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 G3V2T6 193 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 SSNA1O43805 119 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 TPST1O60507 370 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 SLC16A7O60669 478 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 POP7O75817 140 aaKnown RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 S1PR2O95136 353 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 CD160O95971 181 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 CCNE2O96020 404 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 HTR1AP08908 422 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 H2AFXP16104 143 aaPredicted RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 SPI1P17947 270 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 ALOX5APP20292 161 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 PSMA1P25786 263 aaKnown RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 S100GP29377 79 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 HPCAL1P37235 193 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 P2RY1P47900 373 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 PSMD8P48556 350 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 RAB25P57735 213 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 DNAJB13P59910 316 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 RPS20P60866 119 aaKnown RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 RHOAP61586 193 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 DYNLL1P63167 89 aaKnown RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 BTN3A2P78410 334 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 SLC7A9P82251 487 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 IL5RAQ01344 420 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 TFDP2Q14188 446 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 NSDHLQ15738 373 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 PSMD5Q16401 504 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 PYCR3Q53H96 274 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 PPM1LQ5SGD2 360 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 KPRPQ5T749 579 aaPredicted RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 SMARCD3Q6STE5 483 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 TMEM184AQ6ZMB5 413 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 MBOAT1Q6ZNC8 495 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 MOB3BQ86TA1 216 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 ZBTB8OSQ8IWT0 167 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 SVOPLQ8N434 492 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 LRRC52Q8N7C0 313 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 ZSCAN4Q8NAM6 433 aaPredicted RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 ZNF740Q8NDX6 193 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 OR51G1Q8NGK1 321 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 OR5L2Q8NGL0 311 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 OR6K6Q8NGW6 343 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 OR2AE1Q8NHA4 323 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 ACER1Q8TDN7 264 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 ABHD3Q8WU67 409 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 SKA2Q8WVK7 121 aaPredicted RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 ASB17Q8WXJ9 295 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 DNAJC9Q8WXX5 260 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.39□□□□□ -2.03
CD46-213ENST00000471987 C14orf144Q96I85 54 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 KCTD7Q96MP8 289 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 HBEGFQ99075 208 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 CNN2Q99439 309 aaKnown RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 NEUROG2Q9H2A3 272 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 UBE2ZQ9H832 354 aaPredicted RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 NIPAL2Q9H841 368 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 C6orf50Q9HD87 102 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 HMG20AQ9NP66 347 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 FBXO6Q9NRD1 293 aaPredicted RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 C1orf123Q9NWV4 160 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 TBX21Q9UL17 535 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 ANGPT4Q9Y264 503 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 SLC17A4Q9Y2C5 497 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 YARS2Q9Y2Z4 477 aaKnown RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 UNC79Q9P2D8 2635 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 CD109Q6YHK3 1445 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 FGD6Q6ZV73 1430 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 DNMBPQ6XZF7 1577 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 CHD1O14646 1710 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 NALCNQ8IZF0 1738 aa2.39□□□□□ -2.03
CD46-213ENST00000471987 KIF26AQ9ULI4 1882 aaPredicted RBP2.39□□□□□ -2.03
CD46-213ENST00000471987 A0A096LNJ9 63 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 A0A0A6YYD5 115 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 NSG1A0A0A6YYJ2 146 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 A0A0B4J2E0 115 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 GLYATL1P3A0A0U1RQE8 302 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 KIR2DS1A0A191URI9 304 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 A0A1B0GX12 115 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 ANKRD20A5PA0PJZ0 165 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 CCDC160A6NGH7 325 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 C5orf58C9J3I9 102 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 H0YL77 283 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 C15orf65H3BRN8 121 aa2.38□□□□□ -2.03
CD46-213ENST00000471987 J3QLI3 93 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms