RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 MRPL22Q9NWU5 206 aaKnown RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 QPCTLQ9NXS2 382 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 SMPD3Q9NY59 655 aaPredicted RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF581Q9P0T4 197 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 UBQLN2Q9UHD9 624 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF107Q9UII5 783 aaPredicted RBP3.12□□□□□ -1.91
COL9A1-206ENST00000470652 MGAT4BQ9UQ53 548 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 MEMO1Q9Y316 297 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 HDGFL3Q9Y3E1 203 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 UGT2A1Q9Y4X1 527 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 CACNA1DQ01668 2161 aa3.12□□□□□ -1.91
COL9A1-206ENST00000470652 MYO18BQ8IUG5 2567 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 NBPF19A0A087WUL8 3843 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 IGLV1-36A0A0B4J1U3 117 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 LOC100130705A0A1B0GUX0 176 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ARRDC5A6NEK1 342 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 RPL37AP8A6NKH3 93 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF732B4DXR9 585 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 EEF1E1-BLOC1S5C9J1V9 151 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 EEF1E1O43324 174 aaKnown RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SLC16A7O60669 478 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SS18L1O75177 396 aaPredicted RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ENTPD6O75354 484 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 RAD51DO75771 328 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 NDUFB2O95178 105 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 OR6A2O95222 327 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 MT-ATP6P00846 226 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 CD14P08571 375 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 DNAH10OSP0CZ25 163 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 PGA4P0DJD7 388 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 PGA3P0DJD8 388 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 CCL2P13500 99 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ANXA8P13928 327 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 B4GALT1P15291 398 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF43P17038 809 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SLC2A5P22732 501 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 GGT2P36268 569 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SMIM11AP58511 58 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 RPL27P61353 136 aaKnown RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 IL5RAQ01344 420 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 APOFQ13790 326 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 BCL2A1Q16548 175 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 KLHL12Q53G59 568 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM255AQ5JRV8 349 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 LINC01590Q5TEZ4 76 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF691Q5VV52 312 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SLX4IPQ5VYV7 408 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 TRAT1Q6PIZ9 186 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 REG3GQ6UW15 175 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 BAIAP2L2Q6UXY1 529 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 NAA40Q86UY6 237 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF584Q8IVC4 421 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 C20orf196Q8IYI0 205 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 UBE2J2Q8N2K1 259 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 PARP8Q8N3A8 854 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 LRRC18Q8N456 261 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 NOXO1Q8NFA2 376 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 OR6K6Q8NGW6 343 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 LINC01560Q8TB33 94 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ITLN2Q8WWU7 325 aaPredicted RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 LIPHQ8WWY8 451 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 C11orf40Q8WZ69 217 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 HIST1H2ACQ93077 130 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM54Q969K7 222 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 MCHR2Q969V1 340 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 CPNE4Q96A23 557 aaPredicted RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 NRBF2Q96F24 287 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 BSCL2Q96G97 398 aaPredicted RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 GPX7Q96SL4 187 aaPredicted RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 INTS14Q96SY0 518 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 PITX2Q99697 317 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SH3GL3Q99963 347 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 C9orf16Q9BUW7 83 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 MRPL13Q9BYD1 178 aaKnown RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SLC19A3Q9BZV2 496 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 POLR2J2Q9GZM3 115 aaKnown RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 OR51B6Q9H340 312 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 TXNIPQ9H3M7 391 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 YY1AP1Q9H869 796 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SP140LQ9H930 580 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 MARCH7Q9H992 704 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 SLC25A19Q9HC21 320 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 CRLF2Q9HC73 371 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 RAB9BQ9NP90 201 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 IL20Q9NYY1 176 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 THYN1Q9P016 225 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 CLEC2DQ9UHP7 191 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 MCTS1Q9ULC4 181 aaKnown RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 COPS3Q9UNS2 423 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 B9D1Q9UPM9 204 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 TRAPPC4Q9Y296 219 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 POFUT2Q9Y2G5 429 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 NOSIPQ9Y314 301 aaKnown RBP3.11□□□□□ -1.91
COL9A1-206ENST00000470652 GMPPBQ9Y5P6 360 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 ROS1P08922 2347 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 AKAP6Q13023 2319 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 CELSR2Q9HCU4 2923 aa3.11□□□□□ -1.91
COL9A1-206ENST00000470652 PKDREJQ9NTG1 2253 aa3.1□□□□□ -1.91
COL9A1-206ENST00000470652 HELZ2Q9BYK8 2649 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms