RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CLDN18P56856 261 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 AKR1C1Q04828 323 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 C3AR1Q16581 482 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 NSUN5P2Q63ZY6 315 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 LINC00696Q6ZRV3 163 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 BAP18Q8IXM2 172 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 ZPBPQ9BS86 351 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 DDA1Q9BW61 102 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 ARHGAP21Q5T5U3 1957 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 CRYM-AS1A6NIL9 109 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 HLA-HP01893 362 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 CTSDP07339 412 aaPredicted RBP12.69□□□□□ -0.38
CBWD3-205ENST00000469687 GLI4P10075 376 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 TPT1P13693 172 aaKnown RBP12.69□□□□□ -0.38
CBWD3-205ENST00000469687 RBMXP38159 391 aaKnown RBP12.69□□□□□ -0.38
CBWD3-205ENST00000469687 PIGPP57054 158 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 FXYD4P59646 89 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 SPEM2Q0P670 501 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 SP6Q3SY56 376 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 ABHD17BQ5VST6 288 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 TFAP2EQ6VUC0 442 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 ZNF100Q8IYN0 542 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 SLC30A7Q8NEW0 376 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
CBWD3-205ENST00000469687 TMEM45BQ96B21 275 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
CBWD3-205ENST00000469687 FAM173AQ9BQD7 235 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 OR2S2Q9NQN1 319 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 DECR2Q9NUI1 292 aa12.69□□□□□ -0.38
CBWD3-205ENST00000469687 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 FARS2O95363 451 aaKnown RBP12.68□□□□□ -0.38
CBWD3-205ENST00000469687 ZNF883P0CG24 379 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 ITGA3P26006 1051 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 FUT6P51993 359 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 OR1C1Q15619 314 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 IAH1Q2TAA2 248 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-205ENST00000469687 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 SLC22A25Q6T423 547 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 C5orf24Q7Z6I8 188 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 FNDC9Q8TBE3 224 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 CPNE2Q96FN4 548 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-205ENST00000469687 AQP10Q96PS8 301 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 C1QTNF5Q9BXJ0 243 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 TTTY12Q9BZ98 90 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 PRRG4Q9BZD6 226 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 FGF23Q9GZV9 251 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-205ENST00000469687 RGCCQ9H4X1 137 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 C1orf123Q9NWV4 160 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 ZNF629Q9UEG4 869 aaPredicted RBP12.68□□□□□ -0.38
CBWD3-205ENST00000469687 SLC7A11Q9UPY5 501 aa12.68□□□□□ -0.38
CBWD3-205ENST00000469687 IGKV3D-15A0A087WSY6 115 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 A0A1B0GW55 424 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 FGF16O43320 207 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 ZNF708P17019 499 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DTYMKP23919 212 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 AIMP2Q13155 320 aaKnown RBP12.67□□□□□ -0.38
CBWD3-205ENST00000469687 OR2A2Q6IF42 318 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 SLC25A26Q70HW3 274 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 SGPP2Q8IWX5 399 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 ZNF611Q8N823 705 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 OR56B2PQ8NGI1 322 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 SLC5A7Q9GZV3 580 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 NECAP2Q9NVZ3 263 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 IL17BQ9UHF5 180 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 EDARQ9UNE0 448 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 ZFHX4Q86UP3 3567 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 ESPL1Q14674 2120 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 CD59P13987 128 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 SPINK2P20155 84 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 TAGLNQ01995 201 aaKnown RBP12.67□□□□□ -0.38
CBWD3-205ENST00000469687 PHLDA2Q53GA4 152 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 DCAF10Q5QP82 559 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 GGNBP1Q5YKI7 109 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 SPSB4Q96A44 273 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 HS3ST6Q96QI5 342 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 BCO1Q9HAY6 547 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 ZNF391Q9UJN7 358 aa12.67□□□□□ -0.38
CBWD3-205ENST00000469687 PRRC2CQ9Y520 2896 aaKnown RBP12.67□□□□□ -0.38
CBWD3-205ENST00000469687 C5orf49A4QMS7 147 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 XRCC2O43543 280 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 ACTL6AO96019 429 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 OR5AC1P0C628 307 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 RCC1P18754 421 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-205ENST00000469687 ATF4P18848 351 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-205ENST00000469687 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
CBWD3-205ENST00000469687 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
CBWD3-205ENST00000469687 DEFA5Q01523 94 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 NAAAQ02083 359 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 PDSS1Q5T2R2 415 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 DHRS11Q6UWP2 260 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 COLCA1Q6ZS62 124 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 SPERTQ8NA61 448 aa12.66□□□□□ -0.38
CBWD3-205ENST00000469687 MARC2Q969Z3 335 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms