RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CAPSLQ8WWF8 208 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 MEGF10Q96KG7 1140 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 DMRTB1Q96MA1 342 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 OR8B4Q96RC9 309 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 MDFIQ99750 246 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 GAL3ST1Q99999 423 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 DPAGT1Q9H3H5 408 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 LPAR2Q9HBW0 351 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 TMEM100Q9NV29 134 aa12.18□□□□□ -0.46
COL27A1-203ENST00000468565 MRPS7Q9Y2R9 242 aaKnown RBP12.18□□□□□ -0.46
COL27A1-203ENST00000468565 MMP16P51512 607 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 EIF2B1Q14232 305 aaKnown RBP12.17□□□□□ -0.46
COL27A1-203ENST00000468565 SNAI3Q3KNW1 292 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 PLA1AQ53H76 456 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 KCTD18Q6PI47 426 aaPredicted RBP12.17□□□□□ -0.46
COL27A1-203ENST00000468565 RHOUQ7L0Q8 258 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 CMTM4Q8IZR5 234 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 BHLHE23Q8NDY6 225 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 OR10AD1Q8NGE0 317 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 GFI1Q99684 422 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 GCM1Q9NP62 436 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 CENPMQ9NSP4 180 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 DCAF16Q9NXF7 216 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 TRBV5-7A0A0A0MS05 114 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 MTRF1O75570 445 aaKnown RBP12.17□□□□□ -0.46
COL27A1-203ENST00000468565 DHFRP00374 187 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 SOX2P48431 317 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 RAB25P57735 213 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 DGCR2P98153 550 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 TMEM155Q4W5P6 130 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 RAB40AQ8WXH6 277 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 ORAI1Q96D31 301 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 OPA3Q9H6K4 179 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 RANGRFQ9HD47 186 aaPredicted RBP12.17□□□□□ -0.46
COL27A1-203ENST00000468565 COPZ2Q9P299 210 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 NOP16Q9Y3C1 178 aaKnown RBP12.17□□□□□ -0.46
COL27A1-203ENST00000468565 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
COL27A1-203ENST00000468565 MXRA5Q9NR99 2828 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 FAM172BPA6NC97 362 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 H0YL77 283 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 TMEM178BH3BS89 294 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 CD3GP09693 182 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 ARSBP15848 533 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 CCR9P51686 369 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 PRKXP51817 358 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 CD83Q01151 205 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 GLYATL3Q5SZD4 288 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 ZNF679Q8IYX0 411 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 TCTE3Q8IZS6 198 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 SPICQ8N5J4 248 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 ANGPTL6Q8NI99 470 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 SMIM4Q8WVI0 70 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 RNF133Q8WVZ7 376 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 ABHD6Q9BV23 337 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 LIN7BQ9HAP6 207 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 G6PC2Q9NQR9 355 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 ING3Q9NXR8 418 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 NUBP2Q9Y5Y2 271 aa12.16□□□□□ -0.46
COL27A1-203ENST00000468565 COL6A5A8TX70 2615 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 ANXA2P2A6NMY6 339 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 CD300LBA8K4G0 201 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 F5H5P2 479 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 XRCC2O43543 280 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 SULT1B1O43704 296 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 APOC1P02654 83 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 ANXA2P07355 339 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 GATA4P43694 442 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 RRAS2P62070 204 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 ROM1Q03395 351 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 ZNF92Q03936 586 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 RNASE12Q5GAN4 147 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 KRT77Q7Z794 578 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 LRRTM1Q86UE6 522 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 NOXA1Q86UR1 476 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 PRSS35Q8N3Z0 413 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 C15orf40Q8WUR7 153 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 S100A16Q96FQ6 103 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 AMELYQ99218 206 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 FBN1P35555 2871 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 DNHD1Q96M86 4753 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 PNPP00491 289 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 ANOS1P23352 680 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 HSD11B1P28845 292 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 MDH2P40926 338 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 CD200P41217 278 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 KIR3DL2P43630 455 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 CX3CR1P49238 355 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 RIDAP52758 137 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 SCAND1P57086 179 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 DYRK1AQ13627 763 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 ZMYND11Q15326 602 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 WDR38Q5JTN6 314 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 SLC7A5P1Q8MH63 180 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 MUC20Q8N307 709 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 TEX29Q8N6K0 151 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 OR2AE1Q8NHA4 323 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 SUN5Q8TC36 379 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 TSEN15Q8WW01 171 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 ERGIC1Q969X5 290 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms