RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 C11orf88Q6PI97 169 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 OR52N4Q8NGI2 321 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 IL4I1Q96RQ9 567 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 WNT10AQ9GZT5 417 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 MOB1AQ9H8S9 216 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 RAB18Q9NP72 206 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 POMPQ9Y244 141 aa16.57■□□□□ 0.24
COL6A1-203ENST00000466285 IGHV1-8P0DP01 117 aa16.56■□□□□ 0.24
COL6A1-203ENST00000466285 IL24Q13007 206 aa16.56■□□□□ 0.24
COL6A1-203ENST00000466285 CNN3Q15417 329 aaKnown RBP16.56■□□□□ 0.24
COL6A1-203ENST00000466285 LIAT1Q6ZQX7 453 aa16.56■□□□□ 0.24
COL6A1-203ENST00000466285 RNF166Q96A37 237 aaPredicted RBP16.56■□□□□ 0.24
COL6A1-203ENST00000466285 SLC7A6OSQ96CW6 309 aaPredicted RBP16.56■□□□□ 0.24
COL6A1-203ENST00000466285 PKIBQ9C010 78 aa16.56■□□□□ 0.24
COL6A1-203ENST00000466285 CHST6Q9GZX3 395 aa16.56■□□□□ 0.24
COL6A1-203ENST00000466285 AURKAIP1Q9NWT8 199 aaPredicted RBP16.56■□□□□ 0.24
COL6A1-203ENST00000466285 CLN6Q9NWW5 311 aa16.56■□□□□ 0.24
COL6A1-203ENST00000466285 TMEM14AQ9Y6G1 99 aa16.56■□□□□ 0.24
COL6A1-203ENST00000466285 ZAR1LA6NP61 321 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 PIN1P1O15428 100 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 ZNF728P0DKX0 622 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 RNF144BQ7Z419 303 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 CATSPERDQ86XM0 798 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 OR11H6Q8NGC7 330 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 TMEM163Q8TC26 289 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 PHF21AQ96BD5 680 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 HILPDAQ9Y5L2 63 aa16.55■□□□□ 0.24
COL6A1-203ENST00000466285 KIAA2026Q5HYC2 2103 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 A0A1W2PPH5 198 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 DUSP1P28562 367 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 KIR3DL2P43630 455 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 SNU13P55769 128 aaKnown RBP16.54■□□□□ 0.24
COL6A1-203ENST00000466285 DYNC1I2Q13409 638 aaKnown RBP16.54■□□□□ 0.24
COL6A1-203ENST00000466285 UTF1Q5T230 341 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 NXNL2Q5VZ03 156 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 OR8H2Q8N162 312 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 PRSS35Q8N3Z0 413 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 R3HDM4Q96D70 268 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 CEP19Q96LK0 163 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 RBFOX1Q9NWB1 397 aaKnown RBP16.54■□□□□ 0.24
COL6A1-203ENST00000466285 TBL2Q9Y4P3 447 aaKnown RBP16.54■□□□□ 0.24
COL6A1-203ENST00000466285 SNX5Q9Y5X3 404 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 COL7A1Q02388 2944 aa16.54■□□□□ 0.24
COL6A1-203ENST00000466285 A0A1W2PRX2 142 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 ZNF670-ZNF695F2Z2N8 137 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 PSPNO60542 156 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 CD24P25063 80 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 POLR2IP36954 125 aaKnown RBP16.53■□□□□ 0.24
COL6A1-203ENST00000466285 GDNFP39905 211 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 NPBWR2P48146 333 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 ACTA2P62736 377 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 ACTG2P63267 376 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 ACTC1P68032 377 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 ACTA1P68133 377 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 SLC25A26Q70HW3 274 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 MRAPQ8TCY5 172 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 RPS4Y2Q8TD47 263 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 FOXRED1Q96CU9 486 aaPredicted RBP16.53■□□□□ 0.24
COL6A1-203ENST00000466285 ZNF714Q96N38 554 aa16.53■□□□□ 0.24
COL6A1-203ENST00000466285 IGHV2-26A0A0B4J1V2 119 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 A0A1W2PQL4 384 aaPredicted RBP16.52■□□□□ 0.24
COL6A1-203ENST00000466285 FAM172BPA6NC97 362 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 TCTEX1D4Q5JR98 221 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 C10orf99Q6UWK7 81 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 NDUFA11Q86Y39 141 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 RDH10Q8IZV5 341 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 YIPF7Q8N8F6 280 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 OR4S1Q8NGB4 309 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 OR13D1Q8NGV5 346 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 EMG1Q92979 244 aaKnown RBP16.52■□□□□ 0.24
COL6A1-203ENST00000466285 NRBF2Q96F24 287 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 TEX12Q9BXU0 123 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 CHST5Q9GZS9 411 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 ABCB10Q9NRK6 738 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 KRT84Q9NSB2 600 aa16.52■□□□□ 0.24
COL6A1-203ENST00000466285 IGKV1-9A0A0C4DH69 117 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 LOC107986453A0A1B0GWG9 222 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 hCG_1809904A0A1W2PP81 198 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 A0A1W2PPE2 198 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 A0A1W2PR64 198 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 A0A1W2PRV1 198 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 SH2D7A6NKC9 451 aaPredicted RBP16.51■□□□□ 0.23
COL6A1-203ENST00000466285 DHRS7CA6NNS2 312 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 F2RL2O00254 374 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 HAND1O96004 215 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 RBP4P02753 201 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 BCL3P20749 454 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 ZNF91Q05481 1191 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 GDPD3Q7L5L3 318 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 OR4P4Q8NGL7 312 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 DNAJC9Q8WXX5 260 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 ITFG2Q969R8 447 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 MALSU1Q96EH3 234 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 ADAT3Q96EY9 351 aaPredicted RBP16.51■□□□□ 0.23
COL6A1-203ENST00000466285 OCSTAMPQ9BR26 566 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 PLEKHA1Q9HB21 404 aa16.51■□□□□ 0.23
COL6A1-203ENST00000466285 GYG2O15488 501 aa16.5■□□□□ 0.23
COL6A1-203ENST00000466285 SYT7O43581 403 aa16.5■□□□□ 0.23
COL6A1-203ENST00000466285 CHRM2P08172 466 aa16.5■□□□□ 0.23
COL6A1-203ENST00000466285 OR3A1P47881 315 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms