RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZNF850A8MQ14 1090 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 GABRR1P24046 479 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 CDAP32320 146 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 EFNA3P52797 238 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 FOXF1Q12946 379 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 SP5Q6BEB4 398 aaPredicted RBP17.23■□□□□ 0.35
SDF4-205ENST00000465727 RBMXL1Q96E39 390 aaKnown RBP17.23■□□□□ 0.35
SDF4-205ENST00000465727 LIME1Q9H400 295 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 ELL3Q9HB65 397 aaPredicted RBP17.23■□□□□ 0.35
SDF4-205ENST00000465727 SLC2A9Q9NRM0 540 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 AK3Q9UIJ7 227 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 F5P12259 2224 aa17.23■□□□□ 0.35
SDF4-205ENST00000465727 CDS2O95674 445 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 IGHV4-34P06331 123 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 FOSL2P15408 326 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 ANOS1P23352 680 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 ATP6V0CP27449 155 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 CSNK1A1P48729 337 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 CCL20P78556 96 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 KHDC3LQ587J8 217 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 ZNF343Q6P1L6 599 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 Q6ZSR3 168 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 OR6X1Q8NH79 312 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 NPRL2Q8WTW4 380 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 LRRC61Q9BV99 259 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 EXPH5Q8NEV8 1989 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 H3BMH7 237 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 H3BML4 177 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 SLC31A2O15432 143 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 CYB5BO43169 146 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 SCAF4O95104 1147 aaKnown RBP17.22■□□□□ 0.35
SDF4-205ENST00000465727 SOD3P08294 240 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 UCP3P55916 312 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 TAS2R60P59551 318 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 TMEM176BQ3YBM2 270 aaPredicted RBP17.22■□□□□ 0.35
SDF4-205ENST00000465727 CCDC71LQ8N9Z2 235 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 OR10G4Q8NGN3 311 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 LYZL4Q96KX0 146 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 RHOVQ96L33 236 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 HDHD3Q9BSH5 251 aaPredicted RBP17.22■□□□□ 0.35
SDF4-205ENST00000465727 GPR61Q9BZJ8 451 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 VDAC3Q9Y277 283 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 WSB1Q9Y6I7 421 aa17.22■□□□□ 0.35
SDF4-205ENST00000465727 MED19A0JLT2 244 aaPredicted RBP17.21■□□□□ 0.35
SDF4-205ENST00000465727 H0YL77 283 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 GFERP55789 205 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 SRPXP78539 464 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 MFAP5Q13361 173 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 ICAM4Q14773 271 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 OR5R1Q8NH85 324 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 GNPNAT1Q96EK6 184 aaPredicted RBP17.21■□□□□ 0.35
SDF4-205ENST00000465727 C11orf1Q9H5F2 150 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 FAM86C1Q9NVL1 165 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 TMEM242Q9NWH2 141 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 ATG2AQ2TAZ0 1938 aa17.21■□□□□ 0.35
SDF4-205ENST00000465727 TGIF2-C20orf24A0A0A6YYL0 155 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 A0A1B0GV90 55 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 ZNF726A6NNF4 738 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 TRAF3IP2O43734 574 aaPredicted RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 HBE1P02100 147 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 TRGC2P03986 189 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 CTHP32929 405 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 MRPS21P82921 87 aaKnown RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 MYBPHQ13203 477 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 SMAD4Q13485 552 aaKnown RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 GAMTQ14353 236 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 HIST3H3Q16695 136 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 HAGHQ16775 308 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 DPPA3Q6W0C5 159 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 ZFP62Q8NB50 900 aaPredicted RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 LIN37Q96GY3 246 aaPredicted RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 ABHD14BQ96IU4 210 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 MRGPRX4Q96LA9 322 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 SLC25A31Q9H0C2 315 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 SDHAF3Q9NRP4 125 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 LIPGQ9Y5X9 500 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 ZNF732B4DXR9 585 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 PAX1P15863 534 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 FBLP22087 321 aaKnown RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 PPM1FP49593 454 aaPredicted RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 CCR5P51681 352 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 SLC25A53Q5H9E4 307 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 OR2T2Q6IF00 324 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 ZNF700Q9H0M5 742 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 PLEKHF2Q9H8W4 249 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 NXT1Q9UKK6 140 aaKnown RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 COLQQ9Y215 455 aaPredicted RBP17.2■□□□□ 0.34
SDF4-205ENST00000465727 CHD9Q3L8U1 2897 aa17.2■□□□□ 0.34
SDF4-205ENST00000465727 MSTNO14793 375 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 SELLP14151 372 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 KLK2P20151 261 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 LSM6P62312 80 aaKnown RBP17.19■□□□□ 0.34
SDF4-205ENST00000465727 RNF4P78317 190 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 C1orf87Q8N0U7 546 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 LILRB2Q8N423 598 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 D2HGDHQ8N465 521 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 CYB561D1Q8N8Q1 229 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 METTL9Q9H1A3 318 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 ZNF160Q9HCG1 818 aa17.19■□□□□ 0.34
SDF4-205ENST00000465727 HS3ST3B1Q9Y662 390 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms