RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 KNG1P01042 644 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 HCKP08631 526 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 SELLP14151 372 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 HNF1AP20823 631 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 PAX8Q06710 450 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 DGUOKQ16854 277 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 UNQ9370/PRO34162Q6UXP9 181 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 IL17RELQ6ZVW7 336 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 FGFRL1Q8N441 504 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 CD177Q8N6Q3 437 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 ZSCAN4Q8NAM6 433 aaPredicted RBP16.85■□□□□ 0.29
SKA3-205ENST00000465471 OR52N4Q8NGI2 321 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 UFD1Q92890 307 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 MED30Q96HR3 178 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 SEBOXQ9HB31 216 aaPredicted RBP16.85■□□□□ 0.29
SKA3-205ENST00000465471 TMEM138Q9NPI0 162 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 MAB21L2Q9Y586 359 aa16.85■□□□□ 0.29
SKA3-205ENST00000465471 CUBNO60494 3623 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 LOC105371242A0A075B767 164 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 KIR2DS1A0A191URI9 304 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 RFPL4AA6NLU0 287 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 RFPL4AL1F8VTS6 287 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 GPR37O15354 613 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 CPEP16870 476 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 BCL3P20749 454 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 NPBWR2P48146 333 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 PPP3R1P63098 170 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 EMX1Q04741 257 aaPredicted RBP16.84■□□□□ 0.29
SKA3-205ENST00000465471 LIPKQ5VXJ0 399 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 CD276Q5ZPR3 534 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 ZNF367Q7RTV3 350 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 OR5D18Q8NGL1 313 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 CPNE2Q96FN4 548 aaPredicted RBP16.84■□□□□ 0.29
SKA3-205ENST00000465471 POM121Q96HA1 1249 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 MGLLQ99685 303 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 BEX2Q9BXY8 128 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 RHOFQ9HBH0 211 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 RBFOX1Q9NWB1 397 aaKnown RBP16.84■□□□□ 0.29
SKA3-205ENST00000465471 FOXJ3Q9UPW0 622 aa16.84■□□□□ 0.29
SKA3-205ENST00000465471 MAGEA13PA6NCF6 341 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 GABRPO00591 440 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 NDUFB3O43676 98 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 ANGPTL7O43827 346 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 ECDO95905 644 aaPredicted RBP16.83■□□□□ 0.28
SKA3-205ENST00000465471 CYB5AP00167 134 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 FSHBP01225 129 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 MAPK3P27361 379 aaPredicted RBP16.83■□□□□ 0.28
SKA3-205ENST00000465471 BDKRB2P30411 391 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 PRDX2P32119 198 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 GABRA2P47869 451 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 CAV3P56539 151 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 IKZF1Q13422 519 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 INSL4Q14641 139 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 ST8SIA4Q92187 359 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 NUDT16L1Q9BRJ7 211 aaKnown RBP16.83■□□□□ 0.28
SKA3-205ENST00000465471 TMED9Q9BVK6 235 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 C7orf69Q9H7B7 122 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 CKLFQ9UBR5 152 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 METRNQ9UJH8 293 aa16.83■□□□□ 0.28
SKA3-205ENST00000465471 SF3B6Q9Y3B4 125 aaKnown RBP16.83■□□□□ 0.28
SKA3-205ENST00000465471 MAGEB3O15480 346 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 ENSAO43768 121 aaKnown RBP16.82■□□□□ 0.28
SKA3-205ENST00000465471 FAM157CP0CG43 387 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 HSMCR30P0CW71 290 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 TGFBR2P37173 567 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 CEBPDP49716 269 aaPredicted RBP16.82■□□□□ 0.28
SKA3-205ENST00000465471 GP2P55259 537 aaKnown RBP16.82■□□□□ 0.28
SKA3-205ENST00000465471 ZNF146Q15072 292 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 ACSM3Q53FZ2 586 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 LRRC10Q5BKY1 277 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 DDI2Q5TDH0 399 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 ASCL4Q6XD76 172 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 BTN2A1Q7KYR7 527 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 C1QL2Q7Z5L3 287 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 PHC2Q8IXK0 858 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 SPARTQ8N0X7 666 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 FAM58AQ8N1B3 248 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 SVOPQ8N4V2 548 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 ZNF561Q8N587 486 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 ZNRF1Q8ND25 227 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 LY6G5BQ8NDX9 201 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 PXT1Q8NFP0 134 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 C8orf46Q8TAG6 207 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 EMG1Q92979 244 aaKnown RBP16.82■□□□□ 0.28
SKA3-205ENST00000465471 HMG20AQ9NP66 347 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 NOX4Q9NPH5 578 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 IL36RNQ9UBH0 155 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 SLC25A10Q9UBX3 287 aaPredicted RBP16.82■□□□□ 0.28
SKA3-205ENST00000465471 RPUSD1Q9UJJ7 312 aaKnown RBP16.82■□□□□ 0.28
SKA3-205ENST00000465471 LRRC42Q9Y546 428 aa16.82■□□□□ 0.28
SKA3-205ENST00000465471 A0A1W2PPK0 400 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 INMTO95050 263 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 SFTPBP07988 381 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 PPIAL4GP0DN37 164 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 KCTD21Q4G0X4 260 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 UBE2UQ5VVX9 321 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 BTNL3Q6UXE8 466 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 LYPD6Q86Y78 171 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 DMRTB1Q96MA1 342 aa16.81■□□□□ 0.28
SKA3-205ENST00000465471 DCTN5Q9BTE1 182 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms