RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CHRM2P08172 466 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 LIMS3P0CW19 117 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 LIMS4P0CW20 117 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 POU3F4P49335 361 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 RPL31P62899 125 aaKnown RBP13.33□□□□□ -0.28
COL1A1-202ENST00000463440 IL18R1Q13478 541 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 NCR3LG1Q68D85 454 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 C16orf87Q6PH81 154 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 FIP1L1Q6UN15 594 aaKnown RBP13.33□□□□□ -0.28
COL1A1-202ENST00000463440 TMPRSS11AQ6ZMR5 421 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 TMEM86BQ8N661 226 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 TBC1D15Q8TC07 691 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 OPALINQ96PE5 141 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 C19orf12Q9NSK7 152 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 FAM96BQ9Y3D0 163 aa13.33□□□□□ -0.28
COL1A1-202ENST00000463440 TRBV2A0A0J9YWF9 115 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 A0A0U1RQK1 487 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 ANKRD65E5RJM6 399 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 E9PI62 339 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 RNASEK-C17orf49H0YIS7 233 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 ZFPL1O95159 310 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 MT-ND2P03891 347 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 TK1P04183 234 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 MELTFP08582 738 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 MYL12AP19105 171 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 CFPP27918 469 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 ADARB1P78563 741 aaKnown RBP13.32□□□□□ -0.28
COL1A1-202ENST00000463440 MED21Q13503 144 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 AWAT1Q58HT5 328 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-202ENST00000463440 ASCC1Q8N9N2 400 aaKnown RBP13.32□□□□□ -0.28
COL1A1-202ENST00000463440 OR5D14Q8NGL3 314 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 OR5D13Q8NGL4 314 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 OR13C9Q8NGT0 318 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 TSEN15Q8WW01 171 aaKnown RBP13.32□□□□□ -0.28
COL1A1-202ENST00000463440 SSMEM1Q8WWF3 244 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 EMG1Q92979 244 aaKnown RBP13.32□□□□□ -0.28
COL1A1-202ENST00000463440 PDCD1LG2Q9BQ51 273 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 VCXQ9H320 206 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 ZCCHC4Q9H5U6 513 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 UNKLQ9H9P5 680 aaKnown RBP13.32□□□□□ -0.28
COL1A1-202ENST00000463440 DHDHQ9UQ10 334 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 POMT1Q9Y6A1 747 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 HSPE1-MOB4S4R3N1 261 aa13.32□□□□□ -0.28
COL1A1-202ENST00000463440 F8VVB4 439 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 F8VWA3 439 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 K7N7A8 449 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 CASQ2O14958 399 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-202ENST00000463440 NPFFO15130 113 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 ETV1P50549 477 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 UBE2E1P51965 193 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 COL10A1Q03692 680 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 PDZK1IP1Q13113 114 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 CCDC58Q4VC31 144 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 SERPINA12Q8IW75 414 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 PIP4P2Q8N4L2 257 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 OR4M1Q8NGD0 313 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 TNFRSF14Q92956 283 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 SEBOXQ9HB31 216 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-202ENST00000463440 TNFRSF19Q9NS68 423 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 CHCHD3Q9NX63 227 aaKnown RBP13.31□□□□□ -0.28
COL1A1-202ENST00000463440 GLS2Q9UI32 602 aa13.31□□□□□ -0.28
COL1A1-202ENST00000463440 DIMT1Q9UNQ2 313 aaKnown RBP13.31□□□□□ -0.28
COL1A1-202ENST00000463440 EXOSC1Q9Y3B2 195 aaKnown RBP13.31□□□□□ -0.28
COL1A1-202ENST00000463440 hCG_1809904A0A1W2PP81 198 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 A0A1W2PPE2 198 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 A0A1W2PR64 198 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 A0A1W2PRD5 423 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 A0A1W2PRF3 423 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 A0A1W2PRM7 423 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 A0A1W2PRV1 198 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 SPRY1O43609 319 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-202ENST00000463440 CRYBA1P05813 215 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 FBP1P09467 338 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 BCL3P20749 454 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 CAPGP40121 348 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 GTF2A1P52655 376 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-202ENST00000463440 DLX1P56177 255 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 PRB3Q04118 309 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-202ENST00000463440 KLRD1Q13241 179 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 TMEM200BQ69YZ2 307 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 RPL22L1Q6P5R6 122 aaKnown RBP13.3□□□□□ -0.28
COL1A1-202ENST00000463440 LDLRAD3Q86YD5 345 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 C8orf59Q8N0T1 100 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-202ENST00000463440 FAM58AQ8N1B3 248 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 PARP16Q8N5Y8 322 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 RFT1Q96AA3 541 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 DCLRE1BQ9H816 532 aa13.3□□□□□ -0.28
COL1A1-202ENST00000463440 RBFOX1Q9NWB1 397 aaKnown RBP13.3□□□□□ -0.28
COL1A1-202ENST00000463440 SF3B6Q9Y3B4 125 aaKnown RBP13.3□□□□□ -0.28
COL1A1-202ENST00000463440 SULT1B1O43704 296 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 ZNF737O75373 536 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 ALX3O95076 343 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 HAND1O96004 215 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 HCKP08631 526 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 PRKACAP17612 351 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 NPBWR2P48146 333 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 ACSM1Q08AH1 577 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 CDK5R1Q15078 307 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 SPIN3Q5JUX0 258 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms