RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CALHM1Q8IU99 346 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 PDZD9Q8IXQ8 264 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 PNLDC1Q8NA58 520 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 POC1AQ8NBT0 407 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF485Q8NCK3 441 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 CCDC54Q8NEL0 328 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ANGPTL6Q8NI99 470 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 TRMT10AQ8TBZ6 339 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 TBC1D15Q8TC07 691 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 NPRL2Q8WTW4 380 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 RGP1Q92546 391 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 C12orf43Q96C57 262 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 C10orf35Q96D05 121 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 CCL13Q99616 98 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 C16orf95Q9H693 158 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 HES4Q9HCC6 221 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 SNTG1Q9NSN8 517 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNRD1Q9P1U0 126 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ERVK-18Q9QC07 812 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ANKRD61A6NGH8 418 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 DVL1O14640 695 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 SIGLEC5O15389 551 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 XPNPEP2O43895 674 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZFPL1O95159 310 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 LALBAP00709 142 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 PSG2P11465 335 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 PIPP12273 146 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 GLRA1P23415 457 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 HAAOP46952 286 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 GTF2A1P52655 376 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 DLX1P56177 255 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 ERVK11-1P61568 191 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 ARF6P62330 175 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 DGUOKQ16854 277 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 BEAN1Q3B7T3 259 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 KLHL22Q53GT1 634 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 KPRPQ5T749 579 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 XP32Q5T750 250 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR2G6Q5TZ20 316 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 TMEM244Q5VVB8 128 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 ACP7Q6ZNF0 438 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 UTS2BQ765I0 119 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 BTN2A1Q7KYR7 527 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 RNF144BQ7Z419 303 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 VMO1Q7Z5L0 202 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 ANGPTL5Q86XS5 388 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 EGFL6Q8IUX8 553 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 BATF2Q8N1L9 274 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 LY6G5BQ8NDX9 201 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 SETD9Q8NE22 299 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR5T2Q8NGG2 359 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 FAM110DQ8TAY7 271 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 TFAP2CQ92754 450 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 GGHQ92820 318 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 HIST1H2AAQ96QV6 131 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 NRIP2Q9BQI9 281 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 DNTTIP1Q9H147 329 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 PLEKHA1Q9HB21 404 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 TCF7L1Q9HCS4 588 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 FKBP14Q9NWM8 211 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 NLKQ9UBE8 527 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 CLEC2DQ9UHP7 191 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 RPUSD1Q9UJJ7 312 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 VPREB3Q9UKI3 123 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 DIMT1Q9UNQ2 313 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 CAB39Q9Y376 341 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 SIRT4Q9Y6E7 314 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 HSPE1-MOB4S4R3N1 261 aa6.48□□□□□ -1.37
CDC42BPA-210ENST00000462553 DNAH7Q8WXX0 4024 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 FAM230AA0A1W2PPH8 454 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 MEGF11A6BM72 1044 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 TMEM212A6NML5 194 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR2AT4A6NND4 320 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 F8VVB4 439 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 F8VWA3 439 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 G3V4G9 280 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 RNASEK-C17orf49H0YIS7 233 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 NOS1APO75052 506 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 GATBO75879 557 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 TSPAN9O75954 239 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 MT-ND2P03891 347 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 ATF1P18846 271 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 DCKP27707 260 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 CEBPDP49716 269 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 PRB3Q04118 309 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 IL24Q13007 206 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 KLRD1Q13241 179 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 CDK5R1Q15078 307 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 C2orf68Q2NKX9 166 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 C11orf91Q3C1V1 193 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 SAMD5Q5TGI4 173 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 HIST2H2BDQ6DRA6 164 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 DHRS7BQ6IAN0 325 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 METAP1DQ6UB28 335 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 GDPGP1Q6ZNW5 385 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF573Q86YE8 665 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 C8orf59Q8N0T1 100 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 CD177Q8N6Q3 437 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 Q8N7P7 452 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 C8orf46Q8TAG6 207 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms