RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 ST3GAL6Q9Y274 331 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 SPEF1Q9Y4P9 236 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 HIVEP3Q5T1R4 2406 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 F5H5P2 479 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 ABCD4O14678 606 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 GSTP1P09211 210 aaKnown RBP12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 PTAFRP25105 342 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 GIFP27352 417 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 RBM11P57052 281 aaKnown RBP12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 FAM189A2Q15884 450 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 SFRP4Q6FHJ7 346 aaPredicted RBP12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 SCCPDHQ8NBX0 429 aa12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 RNASE6Q93091 150 aaKnown RBP12.76□□□□□ -0.37
RPRD1B-203ENST00000462548 CFAP46Q8IYW2 2715 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 J3QT63 122 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 GNLYP22749 145 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 IL24Q13007 206 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 MAB21L1Q13394 359 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 NKAPLQ5M9Q1 402 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 ELP2Q6IA86 826 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 MKXQ8IYA7 352 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 OR4S1Q8NGB4 309 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 PKIBQ9C010 78 aa12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.374e-9■■■■■ 52.6
RPRD1B-203ENST00000462548 ERRFI1Q9UJM3 462 aaPredicted RBP12.75□□□□□ -0.37
RPRD1B-203ENST00000462548 A0A0B4J293 547 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 A0A1B0GWJ7 208 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 LRP5LA4QPB2 252 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 IGHV3-13P01766 116 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 CD3DP04234 171 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 GRPP07492 148 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 PPP3CBP16298 524 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 RBMXP38159 391 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 BRICD5Q6PL45 260 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 OR4C16Q8NGL9 310 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 LINC01560Q8TB33 94 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 MRPS24Q96EL2 167 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 MRPL37Q9BZE1 423 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 NOP16Q9Y3C1 178 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 CENPXA8MT69 81 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 TRAPPC2LH3BP13 241 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 AKR7A2O43488 359 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 CSF1P09603 554 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 CHATP28329 748 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 GNG2P59768 71 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 AP3S2P59780 193 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 FGF12P61328 243 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 SSBP1Q04837 148 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 C11orf53Q8IXP5 236 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 DHRS9Q9BPW9 319 aa12.74□□□□□ -0.37
RPRD1B-203ENST00000462548 CDIPTO14735 213 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 ACTBP60709 375 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 ACTG1P63261 375 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 HOXA4Q00056 320 aaPredicted RBP12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 ST3GAL2Q16842 350 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 PNLIPRP3Q17RR3 467 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 PRAMEF6Q5VXH4 476 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 OR52W1Q6IF63 320 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 PLET1Q6UQ28 207 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 NUP37Q8NFH4 326 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 DYRK2Q92630 601 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 SULT4A1Q9BR01 284 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 HDHD3Q9BSH5 251 aaPredicted RBP12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 FAAP24Q9BTP7 215 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 CACNG6Q9BXT2 260 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 ICE1Q9Y2F5 2266 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 CYB5AP00167 134 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 HLA-DMAP28067 261 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 MPPED2Q15777 294 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 SPRNQ5BIV9 151 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 SLC22A25Q6T423 547 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 ZNF826PQ6ZT77 177 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 TMEM229BQ8NBD8 167 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 OR13G1Q8NGZ3 307 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 CA5BP1Q8WTZ4 195 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 CXXC4Q9H2H0 198 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 DPAGT1Q9H3H5 408 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 PLEKHJ1Q9NW61 149 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 TAS2R8Q9NYW2 309 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 ANAPC10Q9UM13 185 aa12.73□□□□□ -0.37
RPRD1B-203ENST00000462548 FAM172BPA6NC97 362 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 M0QYG6 137 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 TCRBP04435 133 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 DUSP1P28562 367 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 TLE1Q04724 770 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 ADAM5Q6NVV9 412 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 STEAP1BQ6NZ63 245 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 SNAPC3Q92966 411 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 FBXW5Q969U6 566 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 MARVELD1Q9BSK0 173 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 TINAGL1Q9GZM7 467 aaPredicted RBP12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 PCDHB16Q9NRJ7 776 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 CA10Q9NS85 328 aa12.72□□□□□ -0.37
RPRD1B-203ENST00000462548 MCUBQ9NWR8 336 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms