RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 YIF1BQ5BJH7 314 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 UBE2UQ5VVX9 321 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 PRAMEF6Q5VXH4 476 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 STUMQ69YW2 141 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 MOGAT3Q86VF5 341 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 CALHM1Q8IU99 346 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 CDH26Q8IXH8 852 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 ZDHHC23Q8IYP9 409 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 C1orf87Q8N0U7 546 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 SCCPDHQ8NBX0 429 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 C8orf46Q8TAG6 207 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 MYDGFQ969H8 173 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 SPSB1Q96BD6 273 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 MSI2Q96DH6 328 aaKnown RBP4.77□□□□□ -1.65
VPS36-202ENST00000462289 OR5M11Q96RB7 305 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 PDCD1LG2Q9BQ51 273 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 RTL8AQ9BWD3 113 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 MND1Q9BWT6 205 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 FN3KRPQ9HA64 309 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 PATZ1Q9HBE1 687 aaKnown RBP4.77□□□□□ -1.65
VPS36-202ENST00000462289 RHOFQ9HBH0 211 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 TRIM36Q9NQ86 728 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 DECR2Q9NUI1 292 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 RNF7Q9UBF6 113 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 ITGB1BP2Q9UKP3 347 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 PIGLQ9Y2B2 252 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 TPRKBQ9Y3C4 175 aa4.77□□□□□ -1.65
VPS36-202ENST00000462289 TRBV2A0A0J9YWF9 115 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 A0A1B0GVI7 797 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ANXA2P2A6NMY6 339 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 CEACAM18A8MTB9 384 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 FAM157AC9JC47 383 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 J3QT63 122 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 RGS10O43665 173 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 NDUFA2O43678 99 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 GATBO75879 557 aaKnown RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 LY6G6DO95868 133 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 PPIAL4GP0DN37 164 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 GYPEP15421 78 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 CPEP16870 476 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 EGR1P18146 543 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ATF1P18846 271 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 RBMXP38159 391 aaKnown RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 GZMKP49863 264 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 FUT6P51993 359 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 DVL1P1P54792 670 aaPredicted RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 EMX1Q04741 257 aaPredicted RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 MED21Q13503 144 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ZNF146Q15072 292 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 SSX1Q16384 188 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 Q499Y3 187 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ELP2Q6IA86 826 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ZNF788Q6ZQV5 615 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 DCDC5Q6ZRR9 648 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ZNF826PQ6ZT77 177 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ZNF573Q86YE8 665 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 SAXO1Q8IYX7 474 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 MUC20Q8N307 709 aaPredicted RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 ZSCAN4Q8NAM6 433 aaPredicted RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 POC1AQ8NBT0 407 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 OR5AK2Q8NH90 309 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ANGPTL6Q8NI99 470 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ZNF420Q8TAQ5 688 aaPredicted RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 GPR148Q8TDV2 347 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 PHYHIPQ92561 330 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 CCL17Q92583 94 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 THRSPQ92748 146 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 GHSRQ92847 366 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 RAB1CQ92928 201 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 SDSLQ96GA7 329 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 FAM71F1Q96KD3 344 aaPredicted RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 C1orf147Q96MC9 270 aaPredicted RBP4.76□□□□□ -1.65
VPS36-202ENST00000462289 OPALINQ96PE5 141 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 DERL3Q96Q80 235 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 MICU1Q9BPX6 476 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 TMEM246Q9BRR3 403 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ZNF665Q9H7R5 613 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ZNF696Q9H7X3 374 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ACOT13Q9NPJ3 140 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 SCN3BQ9NY72 215 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 RASL12Q9NYN1 266 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 IL36GQ9NZH8 169 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ERVK-18Q9QC07 812 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 CTSZQ9UBR2 303 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 BLOC1S6Q9UL45 172 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 ERGIC3Q9Y282 383 aa4.76□□□□□ -1.65
VPS36-202ENST00000462289 IGKV1D-17A0A075B6S4 117 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 IGKV1-12A0A0C4DH73 117 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 OOEPA6NGQ2 149 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 LRRC30A6NM36 301 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 B4DSR2 109 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 ZNF732B4DXR9 585 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PTGES3LE9PB15 166 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 CDIPTO14735 213 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 PPIHO43447 177 aaKnown RBP4.75□□□□□ -1.65
VPS36-202ENST00000462289 SULT1B1O43704 296 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 ZNF737O75373 536 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 RHBDL1O75783 438 aa4.75□□□□□ -1.65
VPS36-202ENST00000462289 KDM4BO94953 1096 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms