RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SMIM8Q96KF7 97 aa1.71□□□□□ -2.14
HDAC6-212ENST00000461608 NXF2Q9GZY0 626 aaKnown RBP1.71□□□□□ -2.14
HDAC6-212ENST00000461608 INIPQ9NRY2 104 aa1.71□□□□□ -2.14
HDAC6-212ENST00000461608 DDIT4Q9NX09 232 aa1.71□□□□□ -2.14
HDAC6-212ENST00000461608 MARCOQ9UEW3 520 aaPredicted RBP1.71□□□□□ -2.14
HDAC6-212ENST00000461608 SLC22A7Q9Y694 548 aa1.71□□□□□ -2.14
HDAC6-212ENST00000461608 ANKRD12Q6UB98 2062 aa1.71□□□□□ -2.14
HDAC6-212ENST00000461608 SIGLEC1Q9BZZ2 1709 aa1.71□□□□□ -2.14
HDAC6-212ENST00000461608 USP42Q9H9J4 1324 aaKnown RBP1.7□□□□□ -2.14
HDAC6-212ENST00000461608 LINC00854A0A1B0GVQ3 168 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 OR6C70A6NIJ9 312 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 OR2AT4A6NND4 320 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 CEACAM18A8MTB9 384 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 K7EN84 100 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 hCG_2039718K7EN88 272 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 LGALS9O00182 355 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 MFNGO00587 321 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 TSPOAP1O95153 1857 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 CECR9P0C854 216 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 ZNF14P17017 642 aaPredicted RBP1.7□□□□□ -2.14
HDAC6-212ENST00000461608 SLC6A1P30531 599 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 BRCA1P38398 1863 aaKnown RBP1.7□□□□□ -2.14
HDAC6-212ENST00000461608 ELF3P78545 371 aaPredicted RBP1.7□□□□□ -2.14
HDAC6-212ENST00000461608 MEF2CQ06413 473 aaPredicted RBP1.7□□□□□ -2.14
HDAC6-212ENST00000461608 GPR176Q14439 515 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 CEACAM16Q2WEN9 425 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 KRTAP13-2Q52LG2 175 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 CLLU1OSQ5K130 101 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 ZNF678Q5SXM1 525 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 HBMQ6B0K9 141 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 COPS6Q7L5N1 327 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 MRPL52Q86TS9 123 aaKnown RBP1.7□□□□□ -2.14
HDAC6-212ENST00000461608 GAPTQ8N292 157 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 STK40Q8N2I9 435 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 TCAIMQ8N3R3 496 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 ZNF561Q8N587 486 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 ZDHHC22Q8N966 263 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 RMI2Q96E14 147 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 YPEL4Q96NS1 127 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 PEBP4Q96S96 227 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 CHRNA10Q9GZZ6 450 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 ING2Q9H160 280 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 PLEKHA1Q9HB21 404 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 PARP11Q9NR21 331 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 DIABLOQ9NR28 239 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 RWDD2AQ9UIY3 292 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 SLC22A14Q9Y267 594 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 USH1CQ9Y6N9 552 aa1.7□□□□□ -2.14
HDAC6-212ENST00000461608 NRCAMQ92823 1304 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 A0A1B0GTI1 187 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 HSBP1L1C9JCN9 74 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 RNASEK-C17orf49H0YIS7 233 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 RGS5O15539 181 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 CELP19835 753 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 PRTN3P24158 256 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 PSMB9P28065 219 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 HLA-DMAP28067 261 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 TEAD1P28347 426 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 IL12BP29460 328 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 CMC4P56277 68 aaPredicted RBP1.69□□□□□ -2.14
HDAC6-212ENST00000461608 BIKQ13323 160 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 ELOCQ15369 112 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 IGFBP7Q16270 282 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 BSXQ3C1V8 233 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 TTMPQ5BVD1 217 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 PRR9Q5T870 116 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 DAZ4Q86SG3 579 aaKnown RBP1.69□□□□□ -2.14
HDAC6-212ENST00000461608 SYCE1Q8N0S2 351 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 CYP4Z2PQ8N1L4 340 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 C17orf78Q8N4C9 275 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 ATPAF2Q8N5M1 289 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 ZNF555Q8NEP9 628 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 OR4D6Q8NGJ1 314 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 FAM57AQ8TBR7 257 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 NELFBQ8WX92 580 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 IFT81Q8WYA0 676 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 C22orf15Q8WYQ4 148 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 ZMYND19Q96E35 227 aaPredicted RBP1.69□□□□□ -2.14
HDAC6-212ENST00000461608 CPB2Q96IY4 423 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 BIRC8Q96P09 236 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 PITX2Q99697 317 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 MS4A8Q9BY19 250 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 OR52A5Q9H2C5 316 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 SND1-IT1Q9HBX3 110 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 DAZ1Q9NQZ3 744 aaKnown RBP1.69□□□□□ -2.14
HDAC6-212ENST00000461608 TAC3Q9UHF0 121 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 CFAP45Q9UL16 551 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 ADGRL1O94910 1474 aa1.69□□□□□ -2.14
HDAC6-212ENST00000461608 ELP1O95163 1332 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 BAZ2AQ9UIF9 1905 aaKnown RBP1.68□□□□□ -2.14
HDAC6-212ENST00000461608 YEATS2Q9ULM3 1422 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 GOLGA8QA0A0J9YX86 632 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 LOC389332A0A1B0GUA5 103 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 A0A1B0GW15 77 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 A0A1W2PRG6 482 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 IZUMO1RA6ND01 250 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 F8VP50 259 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 K7EPK0 472 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 FABP7O15540 132 aa1.68□□□□□ -2.14
HDAC6-212ENST00000461608 CRXO43186 299 aaPredicted RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms