RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 WSB1Q9Y6I7 421 aa12.71□□□□□ -0.37
NCL-207ENST00000461347 ALPK3Q96L96 1907 aa12.71□□□□□ -0.37
NCL-207ENST00000461347 GVINP1Q7Z2Y8 2422 aa12.71□□□□□ -0.37
NCL-207ENST00000461347 IFNA10P01566 189 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 IGKV3-11P04433 115 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 RAB5AP20339 215 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 MECP2P51608 486 aaKnown RBP12.71□□□□□ -0.38
NCL-207ENST00000461347 DHRS11Q6UWP2 260 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 LHFPL2Q6ZUX7 228 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 ZNF611Q8N823 705 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 SDSLQ96GA7 329 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 DUSP23Q9BVJ7 150 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 CALHM2Q9HA72 323 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 PIGBOS1A0A0B4J2F0 54 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 DFFBO76075 338 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 CLDN1O95832 211 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 FKBP2P26885 142 aaKnown RBP12.71□□□□□ -0.38
NCL-207ENST00000461347 COL13A1Q5TAT6 717 aaPredicted RBP12.71□□□□□ -0.38
NCL-207ENST00000461347 B4GALT7Q9UBV7 327 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 NOSIPQ9Y314 301 aaKnown RBP12.71□□□□□ -0.38
NCL-207ENST00000461347 LHFPL6Q9Y693 200 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 POMT1Q9Y6A1 747 aa12.71□□□□□ -0.38
NCL-207ENST00000461347 A0A096LPE4 126 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 A0A1W2PPZ6 126 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 TMEM14DPA8MWL7 114 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 CEACAM16Q2WEN9 425 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 FIP1L1Q6UN15 594 aaKnown RBP12.7□□□□□ -0.38
NCL-207ENST00000461347 SYT13Q7L8C5 426 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 IL22RA1Q8N6P7 574 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 OR10D4PQ8NGN7 298 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 AQP10Q96PS8 301 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 KCNIP1Q9NZI2 227 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 TRAPPC2LQ9UL33 140 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 LINC00271P0C7V0 271 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 SMIM6P0DI80 62 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 IAPPP10997 89 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 LYSMD4Q5XG99 296 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 ZNF429Q86V71 674 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 C1orf87Q8N0U7 546 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 SLC2A9Q9NRM0 540 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 HTTP42858 3142 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 KIR2DS1A0A191URI9 304 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 AP4M1O00189 453 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 IL2RAP01589 272 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 RAC2P15153 192 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 KIR2DS4P43632 304 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 HBG1P69891 147 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 HBG2P69892 147 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 NHLH2Q02577 135 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 KIR2DS1Q14954 304 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 PLAC9Q5JTB6 97 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 ETV3LQ6ZN32 361 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 NECAP1Q8NC96 275 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 ADAMTS17Q8TE56 1095 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 TMED3Q9Y3Q3 217 aa12.7□□□□□ -0.38
NCL-207ENST00000461347 ZNF587BE7ETH6 402 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 GEMIN2O14893 280 aaKnown RBP12.69□□□□□ -0.38
NCL-207ENST00000461347 WDR1O75083 606 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 SPINK2P20155 84 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 FUT3P21217 361 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 TLE1Q04724 770 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 OR2T2Q6IF00 324 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 AGBL5Q8NDL9 886 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 EXTL1Q92935 676 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 NAT6Q93015 286 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 TIMM10BQ9Y5J6 103 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 LIPGQ9Y5X9 500 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 ZNF727A8MUV8 499 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 LINC00587B1AMM8 73 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 FTCDNL1E5RQL4 147 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 YKT6O15498 198 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 EDN3P14138 238 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 ZNF32P17041 273 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 IGFBP3P17936 291 aaPredicted RBP12.69□□□□□ -0.38
NCL-207ENST00000461347 PTGER4P35408 488 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 FHITP49789 147 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 RSPO4Q2I0M5 234 aaPredicted RBP12.69□□□□□ -0.38
NCL-207ENST00000461347 SPANXN5Q5MJ07 72 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.69□□□□□ -0.38
NCL-207ENST00000461347 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 UCN2Q96RP3 112 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 TMPRSS5Q9H3S3 457 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 PLEKHF2Q9H8W4 249 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 H0YIZ8 118 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 ADAM20O43506 726 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 HKR1P10072 659 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 ZP4Q12836 540 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 DHRS7BQ6IAN0 325 aaPredicted RBP12.69□□□□□ -0.38
NCL-207ENST00000461347 KMT5CQ86Y97 462 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 OR1F12Q8NHA8 337 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 CABLES2Q9BTV7 478 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 WASF3Q9UPY6 502 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 MTCH2Q9Y6C9 303 aa12.69□□□□□ -0.38
NCL-207ENST00000461347 EIF3GO75821 320 aaKnown RBP eCLIP12.68□□□□□ -0.38
NCL-207ENST00000461347 TUSC2O75896 110 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 APLNRP35414 380 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 HFEQ30201 348 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 LIAT1Q6ZQX7 453 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 TRIOBPQ9H2D6 2365 aa12.68□□□□□ -0.38
NCL-207ENST00000461347 SCAF4O95104 1147 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms