RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PRSS48Q7RTY5 328 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 TIGD4Q8IY51 512 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 SVOPQ8N4V2 548 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 ACBD7Q8N6N7 88 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 MRPL48Q96GC5 212 aaKnown RBP13.91□□□□□ -0.18
TOP3A-202ENST00000461127 MNTQ99583 582 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 TBX5Q99593 518 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 ABCB10Q9NRK6 738 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 SNTG1Q9NSN8 517 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 TCF19Q9Y242 345 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 EXOSC1Q9Y3B2 195 aaKnown RBP13.91□□□□□ -0.18
TOP3A-202ENST00000461127 TMEM14AQ9Y6G1 99 aa13.91□□□□□ -0.18
TOP3A-202ENST00000461127 MEGF11A6BM72 1044 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 CDIPTO14735 213 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 OR2T7P0C7T2 308 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 C21orf33P30042 268 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-202ENST00000461127 HOXD3P31249 432 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-202ENST00000461127 GMFBP60983 142 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 DGUOKQ16854 277 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 ZNF788Q6ZQV5 615 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 RNF144BQ7Z419 303 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 WDR86Q86TI4 376 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 ZNF454Q8N9F8 522 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 OR5AU1Q8NGC0 362 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 OR2T27Q8NH04 317 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 MYCBPQ99417 103 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-202ENST00000461127 VCX3AQ9NNX9 186 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 INPP5EQ9NRR6 644 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 LAMP5Q9UJQ1 280 aa13.9□□□□□ -0.18
TOP3A-202ENST00000461127 VGLL3A8MV65 326 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 J3QRE1 110 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 F2RL2O00254 374 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 MYL12BO14950 172 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 XRCC2O43543 280 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 IGHA1P01876 353 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 ATP6V1B1P15313 513 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 GNALP38405 381 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 HCCSP53701 268 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 EIF2B1Q14232 305 aaKnown RBP13.89□□□□□ -0.19
TOP3A-202ENST00000461127 TEX30Q5JUR7 227 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 FAM185AQ8N0U4 392 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 RPS4Y2Q8TD47 263 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 THEM6Q8WUY1 208 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 MAP6Q96JE9 813 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 GAFA1Q96PS6 74 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 JAM3Q9BX67 310 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 SCOCQ9UIL1 159 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 ERGIC3Q9Y282 383 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 N6AMT1Q9Y5N5 214 aa13.89□□□□□ -0.19
TOP3A-202ENST00000461127 hCG_1809904A0A1W2PP81 198 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 A0A1W2PPE2 198 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 A0A1W2PPH5 198 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 A0A1W2PR64 198 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 A0A1W2PRV1 198 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 TCRBV4S1A1TA0A5B7 111 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 SIGLEC5O15389 551 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 HTR1AP08908 422 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 OTX1P32242 354 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-202ENST00000461127 RPS27P42677 84 aaKnown RBP13.88□□□□□ -0.19
TOP3A-202ENST00000461127 ETV1P50549 477 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 LHFPL3Q86UP9 236 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 TMEM219Q86XT9 240 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 MKXQ8IYA7 352 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 SPARTQ8N0X7 666 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 OR10Z1Q8NGY1 313 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 OTOSQ8NHW6 89 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 ASB17Q8WXJ9 295 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 MICU1Q9BPX6 476 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 MRPS26Q9BYN8 205 aaKnown RBP13.88□□□□□ -0.19
TOP3A-202ENST00000461127 ERVK13-1Q9NX77 482 aa13.88□□□□□ -0.19
TOP3A-202ENST00000461127 ZMAT5Q9UDW3 170 aaKnown RBP13.88□□□□□ -0.19
TOP3A-202ENST00000461127 TSSC4Q9Y5U2 329 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-202ENST00000461127 A0A1W2PQL4 384 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-202ENST00000461127 SYNGR1O43759 233 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 ACAA1P09110 424 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-202ENST00000461127 MAP2K4P45985 399 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 ACTA2P62736 377 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 ACTG2P63267 376 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 TAF13Q15543 124 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 PLA1AQ53H76 456 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 RNLSQ5VYX0 342 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 ZNF322Q6U7Q0 402 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-202ENST00000461127 TMPRSS11AQ6ZMR5 421 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 DCXRQ7Z4W1 244 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 ANGPTL6Q8NI99 470 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 ALG8Q9BVK2 526 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 MND1Q9BWT6 205 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 TTTY10Q9BZA0 68 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 TLNRD1Q9H1K6 362 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 WDR13Q9H1Z4 485 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 KLHDC2Q9Y2U9 406 aa13.87□□□□□ -0.19
TOP3A-202ENST00000461127 A6NDX4 124 aa13.86□□□□□ -0.19
TOP3A-202ENST00000461127 ANXA2P2A6NMY6 339 aa13.86□□□□□ -0.19
TOP3A-202ENST00000461127 LIMS3P0CW19 117 aa13.86□□□□□ -0.19
TOP3A-202ENST00000461127 LIMS4P0CW20 117 aa13.86□□□□□ -0.19
TOP3A-202ENST00000461127 SMIM18P0DKX4 95 aa13.86□□□□□ -0.19
TOP3A-202ENST00000461127 ALOX5APP20292 161 aa13.86□□□□□ -0.19
TOP3A-202ENST00000461127 LMO1P25800 156 aa13.86□□□□□ -0.19
TOP3A-202ENST00000461127 GABRA2P47869 451 aa13.86□□□□□ -0.19
TOP3A-202ENST00000461127 RAB13P51153 203 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms