RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ABCA11PQ4W5N1 156 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 BRICD5Q6PL45 260 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 SLC22A18ASQ8N1D0 253 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 FBXL14Q8N1E6 418 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 OR13H1Q8NG92 308 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 DYRK2Q92630 601 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 BOD1Q96IK1 185 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 FAAP24Q9BTP7 215 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 RPP25Q9BUL9 199 aaKnown RBP9□□□□□ -0.97
CLIP4-208ENST00000456385 DECR2Q9NUI1 292 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 VDAC3Q9Y277 283 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 CCDC163A0A0D9SF12 145 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 BLACEA4D250 179 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 SLC33A1O00400 549 aaPredicted RBP9□□□□□ -0.97
CLIP4-208ENST00000456385 ZNF728P0DKX0 622 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 DUSP1P28562 367 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 IL13RA2Q14627 380 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 DNLZQ5SXM8 178 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 CARD17Q5XLA6 110 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 NAXEQ8NCW5 288 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 OR13D1Q8NGV5 346 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 OIT3Q8WWZ8 545 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 MSI2Q96DH6 328 aaKnown RBP9□□□□□ -0.97
CLIP4-208ENST00000456385 C18orf12Q96KH6 178 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 KIAA1456Q9P272 454 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 CYP8B1Q9UNU6 501 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 SLC7A11Q9UPY5 501 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 TMEM131Q92545 1883 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 A0A1W2PQD3 144 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 IGSF23A1L1A6 192 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 FAM221AA4D161 298 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 MKRN2OSH3BPM6 223 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 TNFRSF10CO14798 259 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 RRP8O43159 456 aaKnown RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 FCGR2AP12318 317 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 EPHA1P21709 976 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 HNRNPA2B1P22626 353 aaKnown RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 ECI1P42126 302 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 PPM1FP49593 454 aaPredicted RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 HLA-DQA1Q5Y7H0 255 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 ZNF880Q6PDB4 577 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 MEX3BQ6ZN04 569 aaKnown RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 OR2C3Q8N628 320 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 OR2AJ1Q8NGZ0 328 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 OR5R1Q8NH85 324 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 PIGTQ969N2 578 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 SIRT7Q9NRC8 400 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 SLC2A9Q9NRM0 540 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 TP53TG5Q9Y2B4 290 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 B4DGG1 531 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 EREGO14944 169 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 PHF1O43189 567 aaPredicted RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 CYTIPO60759 359 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 IL18BPO95998 194 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 HOXB2P14652 356 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 FAHP16930 419 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 G0S2P27469 103 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 NTSR1P30989 418 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 GALNSP34059 522 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 FOXL2P58012 376 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 CD81P60033 236 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 RPL23AP62750 156 aaKnown RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 GABREP78334 506 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 HLA-DRB3P79483 266 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 ZP4Q12836 540 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 GNMTQ14749 295 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 FAM189A2Q15884 450 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 C20orf196Q8IYI0 205 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 TMEM217Q8N7C4 229 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 ZNF283Q8N7M2 679 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 SLC35G3Q8N808 338 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 SLC38A9Q8NBW4 561 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 OR14L1PQ8NHC6 308 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 CLDND2Q8NHS1 167 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 ADAMTS18Q8TE60 1221 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 LYZL4Q96KX0 146 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 TMEM68Q96MH6 324 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 MRPL37Q9BZE1 423 aaKnown RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 WWTR1Q9GZV5 400 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 MAGT1Q9H0U3 335 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 CHST11Q9NPF2 352 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 PNRC2Q9NPJ4 139 aaKnown RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 SERINC1Q9NRX5 453 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 DCAF16Q9NXF7 216 aa8.99□□□□□ -0.97
CLIP4-208ENST00000456385 TDRD6O60522 2096 aaKnown RBP8.99□□□□□ -0.97
CLIP4-208ENST00000456385 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-208ENST00000456385 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-208ENST00000456385 ADAM10O14672 748 aa8.98□□□□□ -0.97
CLIP4-208ENST00000456385 CST7O76096 145 aa8.98□□□□□ -0.97
CLIP4-208ENST00000456385 HSPB1P04792 205 aaKnown RBP8.98□□□□□ -0.97
CLIP4-208ENST00000456385 SFTPDP35247 375 aa8.98□□□□□ -0.97
CLIP4-208ENST00000456385 NUTF2P61970 127 aaKnown RBP8.98□□□□□ -0.97
CLIP4-208ENST00000456385 JOSD1Q15040 202 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-208ENST00000456385 TAF9Q16594 264 aa8.98□□□□□ -0.97
CLIP4-208ENST00000456385 NKAIN1Q4KMZ8 207 aa8.98□□□□□ -0.97
CLIP4-208ENST00000456385 LBHQ53QV2 105 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-208ENST00000456385 SP5Q6BEB4 398 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-208ENST00000456385 SLC22A25Q6T423 547 aa8.98□□□□□ -0.97
CLIP4-208ENST00000456385 DOK3Q7L591 496 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms