RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 EIF5AL1Q6IS14 154 aaKnown RBP17.4■□□□□ 0.38
CSPG5-203ENST00000456150 ATRAIDQ6UW56 229 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 OR10AD1Q8NGE0 317 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 FGFBP3Q8TAT2 258 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 COL25A1Q9BXS0 654 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-203ENST00000456150 FAM86C1Q9NVL1 165 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 ATPIF1Q9UII2 106 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 CNTRLQ7Z7A1 2325 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 PINLYPA6NC86 204 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 GEMIN2O14893 280 aaKnown RBP17.4■□□□□ 0.38
CSPG5-203ENST00000456150 MMP7P09237 267 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-203ENST00000456150 ZNF728P0DKX0 622 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 OPRM1P35372 400 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 RRADP55042 308 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 FOXO1Q12778 655 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 BOLLQ8N9W6 283 aaKnown RBP17.4■□□□□ 0.38
CSPG5-203ENST00000456150 ZNF845Q96IR2 970 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-203ENST00000456150 PRDM14Q9GZV8 571 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 LRFN1Q9P244 771 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 TUBD1Q9UJT1 453 aa17.4■□□□□ 0.38
CSPG5-203ENST00000456150 NOSIPQ9Y314 301 aaKnown RBP17.4■□□□□ 0.38
CSPG5-203ENST00000456150 CACNA1HO95180 2353 aa17.39■□□□□ 0.38
CSPG5-203ENST00000456150 IGKV1-12A0A0C4DH73 117 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 IGKV1D-12P01611 117 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 PIGYQ3MUY2 71 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 ABCA11PQ4W5N1 156 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 RAB11FIP2Q7L804 512 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 FBXL14Q8N1E6 418 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 PSMF1Q92530 271 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 PIGCQ92535 297 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 SPSB4Q96A44 273 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 DDA1Q9BW61 102 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 C1QTNF5Q9BXJ0 243 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 NKX6-2Q9C056 277 aaPredicted RBP17.39■□□□□ 0.37
CSPG5-203ENST00000456150 ZNF286AQ9HBT8 521 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 MMP26Q9NRE1 261 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 ST3GAL6Q9Y274 331 aa17.39■□□□□ 0.37
CSPG5-203ENST00000456150 IGKV3D-15A0A087WSY6 115 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 TMEM218A2RU14 115 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 ZNF708P17019 499 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 PIGPP57054 158 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 MALLQ13021 153 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 PABPC1L2AQ5JQF8 200 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.38■□□□□ 0.37
CSPG5-203ENST00000456150 ADAMTS17Q8TE56 1095 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 POM121Q96HA1 1249 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 THOC3Q96J01 351 aaKnown RBP17.38■□□□□ 0.37
CSPG5-203ENST00000456150 FAM173AQ9BQD7 235 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 LINC00470Q9BZP3 86 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 OR2S2Q9NQN1 319 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 PCSK5Q92824 1860 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 PDCD6O75340 191 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 MRPL33O75394 65 aaKnown RBP17.38■□□□□ 0.37
CSPG5-203ENST00000456150 ATG12O94817 140 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 FAM157CP0CG43 387 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 HKR1P10072 659 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 GGNBP1Q5YKI7 109 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 IL34Q6ZMJ4 242 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 TMEM200AQ86VY9 491 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 TOMM40LQ969M1 308 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 SAT2Q96F10 170 aaPredicted RBP17.38■□□□□ 0.37
CSPG5-203ENST00000456150 NAA60Q9H7X0 242 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 PARPBPQ9NWS1 579 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 ZNF581Q9P0T4 197 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 B4GALT7Q9UBV7 327 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 LPAR3Q9UBY5 353 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 DOCK10Q96BY6 2186 aa17.38■□□□□ 0.37
CSPG5-203ENST00000456150 ZNF705EA8MWA4 302 aaPredicted RBP17.37■□□□□ 0.37
CSPG5-203ENST00000456150 DEDDO75618 318 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 JMJD7P0C870 316 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 EDN3P14138 238 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 PMELP40967 661 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 TSPO2Q5TGU0 170 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 SLC22A25Q6T423 547 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 FOXRED2Q8IWF2 684 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 GALNT14Q96FL9 552 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 LIME1Q9H400 295 aa17.37■□□□□ 0.37
CSPG5-203ENST00000456150 TRIM77I1YAP6 450 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 K7EPK0 472 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 DNASE2O00115 360 aaPredicted RBP17.36■□□□□ 0.37
CSPG5-203ENST00000456150 SIGLEC5O15389 551 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 NUPL2O15504 423 aaKnown RBP17.36■□□□□ 0.37
CSPG5-203ENST00000456150 RBM11P57052 281 aaKnown RBP17.36■□□□□ 0.37
CSPG5-203ENST00000456150 SPINK14Q6IE38 97 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 FAM71E2Q8N5Q1 922 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 NAXEQ8NCW5 288 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 MRPL24Q96A35 216 aaKnown RBP17.36■□□□□ 0.37
CSPG5-203ENST00000456150 TSNAXQ99598 290 aaKnown RBP17.36■□□□□ 0.37
CSPG5-203ENST00000456150 SUCNR1Q9BXA5 334 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 TAF9BQ9HBM6 251 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 F10P00742 488 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 RPL12P30050 165 aaKnown RBP17.36■□□□□ 0.37
CSPG5-203ENST00000456150 SVBPQ8N300 66 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 OR2M7Q8NG81 312 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 LRFN3Q9BTN0 628 aa17.36■□□□□ 0.37
CSPG5-203ENST00000456150 ACTL6AO96019 429 aa17.35■□□□□ 0.37
CSPG5-203ENST00000456150 GLP1RP43220 463 aa17.35■□□□□ 0.37
CSPG5-203ENST00000456150 TMEM211Q6ICI0 200 aa17.35■□□□□ 0.37
CSPG5-203ENST00000456150 COLCA1Q6ZS62 124 aa17.35■□□□□ 0.37
CSPG5-203ENST00000456150 FAM219AQ8IW50 185 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms