RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 DHRS7CA6NNS2 312 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 ZNF670-ZNF695F2Z2N8 137 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 IGHA1P01876 353 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 HOXB6P17509 224 aaKnown RBP12.92□□□□□ -0.34
GPC1-206ENST00000455111 NPBWR2P48146 333 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 ZNF85Q03923 595 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 AMIGO2Q86SJ2 522 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 RDH10Q8IZV5 341 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 OR11H6Q8NGC7 330 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 OR4C13Q8NGP0 309 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 CIB1Q99828 191 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 CDCA4Q9BXL8 241 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 HEXA-AS1Q9H8Q6 139 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 POLDIP2Q9Y2S7 368 aa12.92□□□□□ -0.34
GPC1-206ENST00000455111 PSPNO60542 156 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 IGHV1-8P0DP01 117 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 VSIG10L2P0DP72 767 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 CALCBP10092 127 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 TMEM95Q3KNT9 176 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 UTF1Q5T230 341 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 Q6ZPA2 131 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 Q6ZTK2 550 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 MNTQ99583 582 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 NKX3-1Q99801 234 aaPredicted RBP12.91□□□□□ -0.34
GPC1-206ENST00000455111 WNT10AQ9GZT5 417 aa12.91□□□□□ -0.34
GPC1-206ENST00000455111 ARG1P05089 322 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 ZNF728P0DKX0 622 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 BLCAPP62952 87 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 SSX2Q16385 188 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 YIPF7Q8N8F6 280 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 ASCC1Q8N9N2 400 aaKnown RBP12.9□□□□□ -0.34
GPC1-206ENST00000455111 OR4S1Q8NGB4 309 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 OR2T6Q8NHC8 308 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 EME1Q96AY2 570 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 ADAT3Q96EY9 351 aaPredicted RBP12.9□□□□□ -0.34
GPC1-206ENST00000455111 CEP19Q96LK0 163 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 TEX12Q9BXU0 123 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 CHST5Q9GZS9 411 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 MMP28Q9H239 520 aa12.9□□□□□ -0.34
GPC1-206ENST00000455111 RBFOX1Q9NWB1 397 aaKnown RBP12.9□□□□□ -0.34
GPC1-206ENST00000455111 DNAH9Q9NYC9 4486 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 IGKV1-12A0A0C4DH73 117 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 METTL15A6NJ78 407 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 E9PQ18 207 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 G3V2T6 193 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 IGKV1D-12P01611 117 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 DUSP1P28562 367 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 HTR1FP30939 366 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 GDNFP39905 211 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 NANOS3P60323 173 aaKnown RBP12.89□□□□□ -0.35
GPC1-206ENST00000455111 ZNF91Q05481 1191 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 BNIP1Q12981 228 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 FAM189A2Q15884 450 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 OXLD1Q5BKU9 147 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 SLC25A26Q70HW3 274 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 OR8H2Q8N162 312 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 OR10AC1Q8NH08 325 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 BCAS4Q8TDM0 211 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 NPFFR1Q9GZQ6 430 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 CHST6Q9GZX3 395 aa12.89□□□□□ -0.35
GPC1-206ENST00000455111 WARS2Q9UGM6 360 aaKnown RBP12.89□□□□□ -0.35
GPC1-206ENST00000455111 TBL2Q9Y4P3 447 aaKnown RBP12.89□□□□□ -0.35
GPC1-206ENST00000455111 J3QRE1 110 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 SYT7O43581 403 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 RBP4P02753 201 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 CHRM2P08172 466 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 OR2T7P0C7T2 308 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 BCL3P20749 454 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 EDDM3BP56851 147 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 TP53I3Q53FA7 332 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 GID4Q8IVV7 300 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 MALSU1Q96EH3 234 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 SNX22Q96L94 193 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 CITED2Q99967 270 aaPredicted RBP12.88□□□□□ -0.35
GPC1-206ENST00000455111 GABARAPL3Q9BY60 117 aa12.88□□□□□ -0.35
GPC1-206ENST00000455111 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
GPC1-206ENST00000455111 LOC107986453A0A1B0GWG9 222 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 ENTPD6O75354 484 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 HAND1O96004 215 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 KRT8P05787 483 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 OR3A1P47881 315 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 DYNLT3P51808 116 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 FUT6P51993 359 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 LGALS4P56470 323 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 ACTA2P62736 377 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 ACTG2P63267 376 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 ACTC1P68032 377 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 ACTA1P68133 377 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 EDDM3AQ14507 147 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 CNN3Q15417 329 aaKnown RBP12.87□□□□□ -0.35
GPC1-206ENST00000455111 NSUN5P1Q3KNT7 163 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 C11orf88Q6PI97 169 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 EGFL6Q8IUX8 553 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 OR10H4Q8NGA5 316 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 OR4P4Q8NGL7 312 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 ZNF714Q96N38 554 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 OR5M11Q96RB7 305 aa12.87□□□□□ -0.35
GPC1-206ENST00000455111 OCSTAMPQ9BR26 566 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms