RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 C2orf50Q96LR7 162 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 CMSS1Q9BQ75 279 aaKnown RBP15.68■□□□□ 0.1
MECP2-205ENST00000453960 PRRG4Q9BZD6 226 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 LIME1Q9H400 295 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 OPA3Q9H6K4 179 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 CALHM2Q9HA72 323 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 CRYM-AS1A6NIL9 109 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 TPD52L2O43399 206 aaKnown RBP15.68■□□□□ 0.1
MECP2-205ENST00000453960 PRSS12P56730 875 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 PPIAP62937 165 aaKnown RBP15.68■□□□□ 0.1
MECP2-205ENST00000453960 PLGLB1Q02325 96 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 NHLH1Q02575 133 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 SLC9A3R2Q15599 337 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 SRSF7Q16629 238 aaKnown RBP eCLIP15.68■□□□□ 0.1
MECP2-205ENST00000453960 CALHM1Q8IU99 346 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 INO80EQ8NBZ0 244 aaPredicted RBP15.68■□□□□ 0.1
MECP2-205ENST00000453960 LRRC20Q8TCA0 184 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 PIGCQ92535 297 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 APOBEC3DQ96AK3 386 aaPredicted RBP15.68■□□□□ 0.1
MECP2-205ENST00000453960 POM121L2Q96KW2 1035 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 ARPC5LQ9BPX5 153 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 ZNF2Q9BSG1 426 aaPredicted RBP15.68■□□□□ 0.1
MECP2-205ENST00000453960 FGF23Q9GZV9 251 aaPredicted RBP15.68■□□□□ 0.1
MECP2-205ENST00000453960 NECAP2Q9NVZ3 263 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 PFDN2Q9UHV9 154 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 C14orf166Q9Y224 244 aaKnown RBP15.68■□□□□ 0.1
MECP2-205ENST00000453960 CSAG2Q9Y5P2 127 aa15.68■□□□□ 0.1
MECP2-205ENST00000453960 ADAP1O75689 374 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 OR5H8P0DN80 308 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 CD46P15529 392 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 ARPC4P59998 168 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 SLC10A1Q14973 349 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 PIGYQ3MUY2 71 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 TMEM211Q6ICI0 200 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 OR51F2Q8NH61 342 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 ZDHHC11Q9H8X9 412 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 DNAJB11Q9UBS4 358 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 ST3GAL6Q9Y274 331 aa15.67■□□□□ 0.1
MECP2-205ENST00000453960 HLA-HP01893 362 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 LUMP51884 338 aaPredicted RBP15.66■□□□□ 0.1
MECP2-205ENST00000453960 UCP3P55916 312 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 NUFIP2Q7Z417 695 aaKnown RBP15.66■□□□□ 0.1
MECP2-205ENST00000453960 BVESQ8NE79 360 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 OR56B2PQ8NGI1 322 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 HPSE2Q8WWQ2 592 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 PIK3IP1Q96FE7 263 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 GALNT14Q96FL9 552 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 WDYHV1Q96HA8 205 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 OR10C1Q96KK4 312 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 AQP10Q96PS8 301 aa15.66■□□□□ 0.1
MECP2-205ENST00000453960 C13orf42A0A1B0GVH6 325 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 ZNF850A8MQ14 1090 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 IFNA2P01563 188 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 FUT3P21217 361 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 Q6ZPA2 131 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 ZNF611Q8N823 705 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 SLC30A7Q8NEW0 376 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 RRNAD1Q96FB5 475 aaKnown RBP15.65■□□□□ 0.1
MECP2-205ENST00000453960 ZNF75AQ96N20 296 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 NARFLQ9H6Q4 476 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 CYTL1Q9NRR1 136 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 C1orf123Q9NWV4 160 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 RCC2Q9P258 522 aaKnown RBP15.65■□□□□ 0.1
MECP2-205ENST00000453960 LIPGQ9Y5X9 500 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 A0A1B0GW55 424 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 MPTX1A8MV57 137 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 KRBOX1C9JBD0 128 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 PLATP00750 562 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 DUX4L2P0CJ85 424 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 DUX4L3P0CJ86 424 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 DUX4L4P0CJ87 422 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 DUX4L5P0CJ88 424 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 DUX4L6P0CJ89 424 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 DUX4L7P0CJ90 424 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 PGAM2P15259 253 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 CEACAM21Q3KPI0 293 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 PAN3Q58A45 887 aaKnown RBP15.65■□□□□ 0.1
MECP2-205ENST00000453960 LRTM2Q8N967 370 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 SHARPINQ9H0F6 387 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 PLSCR2Q9NRY7 297 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 DUX4Q9UBX2 424 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 GPR160Q9UJ42 338 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 ZNF175Q9Y473 711 aa15.65■□□□□ 0.1
MECP2-205ENST00000453960 SHANK1Q9Y566 2161 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 A0A096LPE4 126 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 A0A1W2PPZ6 126 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 POM121CA8CG34 1229 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 CDRT15L2A8MXV6 281 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 RRADP55042 308 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 RAB1AP62820 205 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 MALLQ13021 153 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 PRDX4Q13162 271 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 RBM39Q14498 530 aaKnown RBP15.64■□□□□ 0.09
MECP2-205ENST00000453960 ATXN7L3Q14CW9 347 aaPredicted RBP15.64■□□□□ 0.09
MECP2-205ENST00000453960 TRIP6Q15654 476 aaKnown RBP15.64■□□□□ 0.09
MECP2-205ENST00000453960 FAM209AQ5JX71 171 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 IL22RA1Q8N6P7 574 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 SUMF1Q8NBK3 374 aa15.64■□□□□ 0.09
MECP2-205ENST00000453960 MARS2Q96GW9 593 aaKnown RBP15.64■□□□□ 0.09
MECP2-205ENST00000453960 ZNF471Q9BX82 626 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms