RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SLX4IPQ5VYV7 408 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 C16orf89Q6UX73 402 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 Q6ZSR3 168 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 MRPL41Q8IXM3 137 aaKnown RBP11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 Q8IYB0 196 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 ENTHD1Q8IYW4 607 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 OR10G2Q8NGC3 310 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 OR4P4Q8NGL7 312 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 RBM14Q96PK6 669 aaKnown RBP11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 TEAD3Q99594 435 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 SLC25A33Q9BSK2 321 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 DPM3Q9P2X0 92 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 U3KQK5 164 aa11.4□□□□□ -0.58
LYSMD3-202ENST00000453259 DNAH9Q9NYC9 4486 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 OOSP1A8MZH6 123 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 PSMD9O00233 223 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 SASH3O75995 380 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 LPLP06858 475 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 HOXB6P17509 224 aaKnown RBP11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 LMO1P25800 156 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 PEX2P28328 305 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 HOXD3P31249 432 aaPredicted RBP11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 RIDAP52758 137 aaKnown RBP11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 ABCA11PQ4W5N1 156 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 FAM98BQ52LJ0 330 aaKnown RBP11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 CCDC144NLQ6NUI1 221 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 TCF23Q7RTU1 214 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 RNF144BQ7Z419 303 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 ARHGAP24Q8N264 748 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 IQCF1Q8N6M8 205 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 STMN2Q93045 179 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 CEP19Q96LK0 163 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 FEVQ99581 238 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 NIPSNAP1Q9BPW8 284 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 CHID1Q9BWS9 393 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 GAL3ST2Q9H3Q3 398 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 ZFP57Q9NU63 452 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 VNN3Q9NY84 501 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 GLS2Q9UI32 602 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 UBE2J1Q9Y385 318 aaPredicted RBP11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 U3KQV3 271 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 V9GYS6 101 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 DSCAML1Q8TD84 2053 aa11.39□□□□□ -0.59
LYSMD3-202ENST00000453259 LEUTXA8MZ59 168 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 TTRP02766 147 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 SLC2A5P22732 501 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 ERP29P30040 261 aaKnown RBP11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 THBS3P49746 956 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 RPS7P62081 194 aaKnown RBP11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 DGCR2P98153 550 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 ASRGL1Q7L266 308 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 CPOQ8IVL8 374 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 COMMD1Q8N668 190 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 CCDC54Q8NEL0 328 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 GIPC3Q8TF64 312 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 MNTQ99583 582 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 PAPOLBQ9NRJ5 636 aaKnown RBP11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 PCDHB16Q9NRJ7 776 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 SLC7A11Q9UPY5 501 aa11.38□□□□□ -0.59
LYSMD3-202ENST00000453259 FUOMA2VDF0 154 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 PSMB11A5LHX3 300 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 LOC110117498-PIK3R3F6TDL0 507 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 MGST3O14880 152 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 CD34P28906 385 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 MYCNOSP40205 109 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 MNDAP41218 407 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 CDC42P60953 191 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 ESRRGP62508 458 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 RPL23AP62750 156 aaKnown RBP11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 GINS1Q14691 196 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 BCL2L15Q5TBC7 163 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 ETV3LQ6ZN32 361 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 ELMOD2Q8IZ81 293 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 CHPT1Q8WUD6 406 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 GPR173Q9NS66 373 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 HHLA2Q9UM44 414 aa11.37□□□□□ -0.59
LYSMD3-202ENST00000453259 TCRBV5S2A0A599 114 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 H0YHG0 523 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 GATBO75879 557 aaKnown RBP11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 IGLV1-47P01700 117 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 AMY1AP04745 511 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 AMY2AP04746 511 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 ATP6V1B2P21281 511 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 CCL1P22362 96 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 CDK5Q00535 292 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 PPP1R8Q12972 351 aaKnown RBP11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 EDDM3AQ14507 147 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 GRK1Q15835 563 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 HSP90B2PQ58FF3 399 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 DMRTC1Q5HYR2 192 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 SPIN3Q5JUX0 258 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 CYP2R1Q6VVX0 501 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 HEPN1Q6WQI6 88 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 DEFB107AQ8IZN7 70 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 ABHD12Q8N2K0 398 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 OR14K1Q8NGZ2 314 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 ZNF556Q9HAH1 456 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 PLEKHA1Q9HB21 404 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 TAS2R3Q9NYW6 316 aa11.36□□□□□ -0.59
LYSMD3-202ENST00000453259 TAGLN3Q9UI15 199 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms