RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ACOT6Q3I5F7 207 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 TTC32Q5I0X7 151 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF684Q5T5D7 378 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 AVPI1Q5T686 147 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SAMD13Q5VXD3 122 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF66Q6ZN08 573 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 FOXL2NBQ6ZUU3 175 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 LRRTM1Q86UE6 522 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZBTB8OSQ8IWT0 167 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 CADM2Q8N3J6 435 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 RAB42Q8N4Z0 105 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 TMEM178AQ8NBL3 297 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ST6GALNAC3Q8NDV1 305 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR5AP2Q8NGF4 316 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 LNX1Q8TBB1 728 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SSC4DQ8WTU2 575 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 DNAJC9Q8WXX5 260 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 IL22RA2Q969J5 263 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 TAMM41Q96BW9 452 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 GMPPAQ96IJ6 420 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF354BQ96LW1 612 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 GPER1Q99527 375 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 C12orf57Q99622 126 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 VPS25Q9BRG1 176 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 MARVELD1Q9BSK0 173 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SRXN1Q9BYN0 137 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ULBP3Q9BZM4 244 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SELENOIQ9C0D9 397 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZSCAN16Q9H4T2 348 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SIX2Q9NPC8 291 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 RRAGDQ9NQL2 400 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 CISHQ9NSE2 258 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SS18L2Q9UHA2 77 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 VAX2Q9UIW0 290 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 RARRES3Q9UL19 164 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF257Q9Y2Q1 563 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 CARHSP1Q9Y2V2 147 aaKnown RBP3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 KCNE3Q9Y6H6 103 aa3.54□□□□□ -1.84
HMGB3P21-201ENST00000452483 SOGA1O94964 1423 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGHV3OR16-12A0A075B7B8 117 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 TRAV8-2A0A0B4J237 113 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGKV1D-13A0A0B4J2D9 117 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGHV3-20A0A0C4DH32 117 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 TMEM150BA6NC51 233 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 C12orf77C9JDV5 145 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 PFDN1O60925 122 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 STK16O75716 305 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 YIF1AO95070 293 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 PDYNP01213 254 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 CRYGDP07320 174 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 GKN3PP0CG01 181 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR5H8P0DN80 308 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGKV1-13P0DP09 117 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 SPNP16150 400 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 VDAC1P21796 283 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 PAX6P26367 422 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 S100A7P31151 101 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 KLK7P49862 253 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 CSRP3P50461 194 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 GZMMP51124 257 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 SELENOTP62341 195 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 Q0VFX4 171 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 TMEM255AQ5JRV8 349 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 RSBN1Q5VWQ0 802 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 TEX36Q5VZQ5 186 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 OPN5Q6U736 354 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 DGAT2L6Q6ZPD8 337 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 SLC16A13Q7RTY0 426 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 PPP1R27Q86WC6 154 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF567Q8N184 647 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF485Q8NCK3 441 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR10G7Q8NGN6 311 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR9I1Q8NGQ6 314 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 NABP1Q96AH0 204 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 EXOSC8Q96B26 276 aaKnown RBP3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 BORCS7Q96B45 105 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 SEH1LQ96EE3 360 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 MRPL48Q96GC5 212 aaKnown RBP3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 BIRC8Q96P09 236 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 PPP1R2P1Q96PQ5 205 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 METTL26Q96S19 204 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 HIST1H4GQ99525 98 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 KIR2DL4Q99706 377 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 C2orf88Q9BSF0 95 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 SLIRPQ9GZT3 109 aaKnown RBP3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 ABCG5Q9H222 651 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 OR51E2Q9H255 320 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 FAM96AQ9H5X1 160 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 MOB1AQ9H8S9 216 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 TAS2R5Q9NYW4 299 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 IDI2-AS1Q9NZ38 188 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 THAP10Q9P2Z0 257 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 ZNF223Q9UK11 482 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 PYCARDQ9ULZ3 195 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 CKAP5Q14008 2032 aa3.53□□□□□ -1.84
HMGB3P21-201ENST00000452483 IGHV4OR15-8A0A075B7B6 117 aa3.52□□□□□ -1.85
HMGB3P21-201ENST00000452483 TRGV8A0A0C4DH27 118 aa3.52□□□□□ -1.85
HMGB3P21-201ENST00000452483 A0A0G2JRQ6 117 aa3.52□□□□□ -1.85
HMGB3P21-201ENST00000452483 PQLC2LA1A4F0 135 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms