RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 SLC25A28Q96A46 364 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 C1orf147Q96MC9 270 aaPredicted RBP9.71□□□□□ -0.86
SCN9A-204ENST00000452182 BPESC1Q9GZL8 116 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 METTL9Q9H1A3 318 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 WDR13Q9H1Z4 485 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 PLGRKTQ9HBL7 147 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 TMEM165Q9HC07 324 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 NDUFA13Q9P0J0 144 aa9.71□□□□□ -0.86
SCN9A-204ENST00000452182 PRRC2AP48634 2157 aaKnown RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 SETXQ7Z333 2677 aaKnown RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 IGHV4-30-2A0A087WSY4 118 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 SMIM31A0A1B0GVY4 71 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 F8VVB4 439 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 F8VWA3 439 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 WNT9BO14905 357 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 NDUFA2O43678 99 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 NOL3O60936 208 aaKnown RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 NXPH2O95156 264 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 BPNT1O95861 308 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 BCL3P20749 454 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 CPT2P23786 658 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 RBMXP38159 391 aaKnown RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 RPS19P39019 145 aaKnown RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 NPBWR2P48146 333 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 RSU1Q15404 277 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 FAM201AQ5SY85 155 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 ATPAF1Q5TC12 328 aaPredicted RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 SFXN4Q6P4A7 337 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 USP43Q70EL4 1123 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 FAM58AQ8N1B3 248 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 OR51T1Q8NGJ9 327 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 ISOC1Q96CN7 298 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 MRPS24Q96EL2 167 aaKnown RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF488Q96MN9 340 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 NKX3-1Q99801 234 aaPredicted RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 DNTTIP1Q9H147 329 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 SEBOXQ9HB31 216 aaPredicted RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 HMG20AQ9NP66 347 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 RBFOX1Q9NWB1 397 aaKnown RBP9.7□□□□□ -0.86
SCN9A-204ENST00000452182 NLKQ9UBE8 527 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 STEAP1Q9UHE8 339 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 ING4Q9UNL4 249 aa9.7□□□□□ -0.86
SCN9A-204ENST00000452182 TNFRSF13BO14836 293 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-204ENST00000452182 KNG1P01042 644 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 CSTBP04080 98 aaKnown RBP9.69□□□□□ -0.86
SCN9A-204ENST00000452182 CLEC2LP0C7M8 214 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 ARSBP15848 533 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 CD80P33681 288 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 SERPINB10P48595 397 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 FGF12P61328 243 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 HOXA4Q00056 320 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-204ENST00000452182 MXD1Q05195 221 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF146Q15072 292 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 RAB11BQ15907 218 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 NHLRC3Q5JS37 347 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 SPIN3Q5JUX0 258 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 STUMQ69YW2 141 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 SFRP4Q6FHJ7 346 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-204ENST00000452182 FIP1L1Q6UN15 594 aaKnown RBP9.69□□□□□ -0.86
SCN9A-204ENST00000452182 DCDC5Q6ZRR9 648 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 SPICQ8N5J4 248 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 BOLLQ8N9W6 283 aaKnown RBP9.69□□□□□ -0.86
SCN9A-204ENST00000452182 EMG1Q92979 244 aaKnown RBP9.69□□□□□ -0.86
SCN9A-204ENST00000452182 SLC25A46Q96AG3 418 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 MRI1Q9BV20 369 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 CST11Q9H112 138 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 DNAJB11Q9UBS4 358 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 FBLN5Q9UBX5 448 aa9.69□□□□□ -0.86
SCN9A-204ENST00000452182 OR2AT4A6NND4 320 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 H3BMQ9 156 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF205O95201 554 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 GTF2F2P13984 249 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 SCAND1P57086 179 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 QRFPP83859 136 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 SLC22A6Q4U2R8 563 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 AVPI1Q5T686 147 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 OR2W3Q7Z3T1 314 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 ANGPTL6Q8NI99 470 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 KCNG3Q8TAE7 436 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 NDNFQ8TB73 568 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 FAM3DQ96BQ1 224 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 SEH1LQ96EE3 360 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 TMEM246Q9BRR3 403 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 DCSTAMPQ9H295 470 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 LIN7BQ9HAP6 207 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 ELL3Q9HB65 397 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-204ENST00000452182 KAAG1Q9UBP8 84 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 RSL24D1Q9UHA3 163 aaKnown RBP9.68□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF222Q9UK12 451 aa9.68□□□□□ -0.86
SCN9A-204ENST00000452182 IGKV1D-17A0A075B6S4 117 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 A0A096LNT2 108 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 ISPDA4D126 451 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 DPPA5A6NC42 116 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 TMEM14DPA8MWL7 114 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 LDLRAD4O15165 306 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 HTR3BO95264 441 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 VSIG8P0DPA2 414 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 PSG2P11465 335 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 PRKACAP17612 351 aa9.67□□□□□ -0.86
SCN9A-204ENST00000452182 SERPINA2P20848 420 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms