RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LPAR6P43657 344 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MVDP53602 400 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SUB1P53999 127 aaKnown RBP eCLIP1.97□□□□□ -2.09
USP53-202ENST00000450251 SNU13P55769 128 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 PCBP3P57721 371 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 MLF1P58340 268 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HERVK_113P61574 105 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LSM6P62312 80 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 RBPJQ06330 500 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OLIG2Q13516 323 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PYY3Q5JQD4 70 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ACTL10Q5JWF8 245 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 RASL11AQ6T310 242 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CYP2G1PQ6ZSU1 146 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OTOP2Q7RTS6 562 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FAM129CQ86XR2 697 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 RBM45Q8IUH3 476 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 YAF2Q8IY57 180 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 NPWQ8N729 165 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ACVR1CQ8NER5 493 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ABHD3Q8WU67 409 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 C11orf40Q8WZ69 217 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 NEUROG1Q92886 237 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 FGF14Q92915 247 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SPSB1Q96BD6 273 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 C10orf35Q96D05 121 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ADAT3Q96EY9 351 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 GUCD1Q96NT3 240 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR2V2Q96R30 315 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 RARRES2Q99969 163 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ADAT1Q9BUB4 502 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 TTTY10Q9BZA0 68 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TMEM126AQ9H061 195 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 EPHX3Q9H6B9 360 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PDLIM7Q9NR12 457 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PSG11Q9UQ72 335 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 NRXN2Q9P2S2 1712 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 COL11A1P12107 1806 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 TRAV36DV7A0A075B6V5 113 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 UPK3BL1B0FP48 263 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 UPK3BL2E5RIL1 263 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 RPL36A-HNRNPH2H7BZ11 118 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 XRCC2O43543 280 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 HYAL3O43820 417 aaPredicted RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 CD5LO43866 347 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PEX11BO96011 259 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 GLRA1P23415 457 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OTX2P32243 289 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LBX1P52954 281 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 EMP1P54849 157 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 LILRA4P59901 499 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 DCAF7P61962 342 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 EWSR1Q01844 656 aaKnown RBP eCLIP1.97□□□□□ -2.09
USP53-202ENST00000450251 CRMP1Q14194 572 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SHBQ15464 509 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TESK1Q15569 626 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TCTEX1D4Q5JR98 221 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 TUSC5Q8IXB3 177 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CELF5Q8N6W0 485 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 OR9G4Q8NGQ1 327 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR1N2Q8NGR9 330 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 OR4A16Q8NH70 328 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 PPP1R35Q8TAP8 253 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 Q8WTZ3 238 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 CLEC4DQ8WXI8 215 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MRPL18Q9H0U6 180 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 S1PR5Q9H228 398 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MMP25Q9NPA2 562 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SPHK2Q9NRA0 654 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 MRPL17Q9NRX2 175 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 TAC3Q9UHF0 121 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ANXA10Q9UJ72 324 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ZNF257Q9Y2Q1 563 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 SF3B6Q9Y3B4 125 aaKnown RBP1.97□□□□□ -2.09
USP53-202ENST00000450251 SPCS1Q9Y6A9 102 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 ANKRD36A6QL64 1941 aa1.97□□□□□ -2.09
USP53-202ENST00000450251 KIR2DL5BA0A0G2JN68 375 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 KIR2DL5BA0A0G2JPC4 375 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 ANTXRLA6NF34 631 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 DPRXA6NFQ7 191 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 ZNF860A6NHJ4 632 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 TMEM150CB9EJG8 249 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 SAP18O00422 153 aaKnown RBP1.96□□□□□ -2.09
USP53-202ENST00000450251 EREGO14944 169 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 ADAM20O43506 726 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 GNG7O60262 68 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 EIF4E2O60573 245 aaKnown RBP1.96□□□□□ -2.09
USP53-202ENST00000450251 CTSVO60911 334 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 UTS2O95399 124 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 SLC2A10O95528 541 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 CXorf1O96002 111 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 ORM1P02763 201 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 CA3P07451 260 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 ZNF17P17021 662 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 FUT3P21217 361 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 FKBP2P26885 142 aaKnown RBP1.96□□□□□ -2.09
USP53-202ENST00000450251 BTCP35070 178 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 KIR2DS2P43631 304 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 GPR3P46089 330 aa1.96□□□□□ -2.09
USP53-202ENST00000450251 RPS11P62280 158 aaKnown RBP eCLIP1.96□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms