RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 WDR1O75083 606 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 GUSBP08236 651 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 ST6GAL1P15907 406 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 CRISP2P16562 243 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 NHLRC3Q5JS37 347 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 PATE1Q8WXA2 126 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 ISOC2Q96AB3 205 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 LRRC3BQ96PB8 259 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 TMEM147Q9BVK8 224 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 SLC45A2Q9UMX9 530 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 ADAM20O43506 726 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 PMP22Q01453 160 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 FAM53BQ14153 422 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 IGFBP7Q16270 282 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 KHDC3LQ587J8 217 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 TMEM91Q6ZNR0 172 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 SPACA5Q96QH8 159 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 GOLT1BQ9Y3E0 138 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 DBX1A6NMT0 343 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 M0R1X1 148 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 RPL13AP40429 203 aaKnown RBP12.4□□□□□ -0.42
ITGB4-202ENST00000449880 MDH2P40926 338 aaKnown RBP12.4□□□□□ -0.42
ITGB4-202ENST00000449880 GPM6AP51674 278 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 CLEC12BQ2HXU8 276 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 TMEM191AQ9H0A3 160 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 ESRP2Q9H6T0 727 aaKnown RBP12.4□□□□□ -0.42
ITGB4-202ENST00000449880 K7ERU9 68 aa12.4□□□□□ -0.43
ITGB4-202ENST00000449880 MASP2O00187 686 aa12.4□□□□□ -0.43
ITGB4-202ENST00000449880 FGF2P09038 288 aa12.4□□□□□ -0.43
ITGB4-202ENST00000449880 FAM3AP98173 230 aa12.4□□□□□ -0.43
ITGB4-202ENST00000449880 FAM78BQ5VT40 261 aa12.4□□□□□ -0.43
ITGB4-202ENST00000449880 TSEN54Q7Z6J9 526 aaKnown RBP12.4□□□□□ -0.43
ITGB4-202ENST00000449880 OR5AU1Q8NGC0 362 aa12.4□□□□□ -0.43
ITGB4-202ENST00000449880 S1PR3Q99500 378 aa12.4□□□□□ -0.43
ITGB4-202ENST00000449880 C20orf141Q9NUB4 165 aa12.4□□□□□ -0.43
ITGB4-202ENST00000449880 MLF1P58340 268 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 ERHP84090 104 aaKnown RBP12.39□□□□□ -0.43
ITGB4-202ENST00000449880 LRP11Q86VZ4 500 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 OR10X1Q8NGY0 326 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 IL22RA2Q969J5 263 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 SNX22Q96L94 193 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 ZNF552Q9H707 407 aaPredicted RBP12.39□□□□□ -0.43
ITGB4-202ENST00000449880 LIPGQ9Y5X9 500 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 ONECUT2O95948 504 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 OR5AC1P0C628 307 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 STAG3L2P0CL84 134 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 DEFB109BQ30KR1 87 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 ZNF660Q6AZW8 331 aaPredicted RBP12.39□□□□□ -0.43
ITGB4-202ENST00000449880 MRGPRGQ86SM5 289 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 PLA2G2FQ9BZM2 168 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 FOXQ1Q9C009 403 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 CA10Q9NS85 328 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 AQP7O14520 342 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 GLI4P10075 376 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 WFDC8Q8IUA0 241 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 Q8IYB0 196 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 PUSL1Q8N0Z8 303 aaKnown RBP12.39□□□□□ -0.43
ITGB4-202ENST00000449880 EXTL1Q92935 676 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 CLDN23Q96B33 292 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 POM121Q96HA1 1249 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 NDFIP1Q9BT67 221 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 C1QTNF6Q9BXI9 259 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 WDR61Q9GZS3 305 aaKnown RBP12.39□□□□□ -0.43
ITGB4-202ENST00000449880 TRGV8A0A0C4DH27 118 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 A0A1W2PNV4 684 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 DEDDO75618 318 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 HLA-GP17693 338 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 HYAL1Q12794 435 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 ZNF718Q3SXZ3 478 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 ADIPOR1Q96A54 375 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 RAB33BQ9H082 229 aa12.39□□□□□ -0.43
ITGB4-202ENST00000449880 CXorf65A6NEN9 183 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 CIDEAO60543 219 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 WISP3O95389 354 aaPredicted RBP12.38□□□□□ -0.43
ITGB4-202ENST00000449880 CDC34P49427 236 aaPredicted RBP12.38□□□□□ -0.43
ITGB4-202ENST00000449880 GNG4P50150 75 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 SLC37A1P57057 533 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 ZNF141Q15928 474 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 PLAC9Q5JTB6 97 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 C10orf35Q96D05 121 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 ZNFX1Q9P2E3 1918 aaKnown RBP12.38□□□□□ -0.43
ITGB4-202ENST00000449880 FAM24AA6NFZ4 105 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 FFAR1O14842 300 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 DHRS3O75911 302 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 YIF1AO95070 293 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 CD99P14209 185 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 UBE3DQ7Z6J8 389 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 NUBPLQ8TB37 319 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 MRPS24Q96EL2 167 aaKnown RBP12.38□□□□□ -0.43
ITGB4-202ENST00000449880 KIAA1324LA8MWY0 1029 aaPredicted RBP12.38□□□□□ -0.43
ITGB4-202ENST00000449880 RPS27P42677 84 aaKnown RBP12.38□□□□□ -0.43
ITGB4-202ENST00000449880 SPCS3P61009 180 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 GGTLC2Q14390 218 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 KISS1Q15726 138 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 RNASEKQ6P5S7 137 aaKnown RBP12.38□□□□□ -0.43
ITGB4-202ENST00000449880 OCIAD1Q9NX40 245 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 METTL1Q9UBP6 276 aaKnown RBP12.38□□□□□ -0.43
ITGB4-202ENST00000449880 LANCL1O43813 399 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 PDE6DO43924 150 aa12.38□□□□□ -0.43
ITGB4-202ENST00000449880 F2RP25116 425 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms