RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 VCX3AQ9NNX9 186 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 C19orf12Q9NSK7 152 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 LRP12Q9Y561 859 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 HILPDAQ9Y5L2 63 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 LHFPL6Q9Y693 200 aa9.95□□□□□ -0.82
AC004540.1-204ENST00000449537 TPTEP56180 551 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 KCTD21Q4G0X4 260 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 C9orf152Q5JTZ5 239 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 LDLRAD2Q5SZI1 272 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 TMEM200BQ69YZ2 307 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 PLBD1Q6P4A8 553 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 ZNF782Q6ZMW2 699 aaPredicted RBP9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 CFAP77Q6ZQR2 320 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 ZBTB46Q86UZ6 589 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 IQCF1Q8N6M8 205 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 ZNRF1Q8ND25 227 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 TMEM185AQ8NFB2 350 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 MRPS26Q9BYN8 205 aaKnown RBP9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 LIN7BQ9HAP6 207 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 TVP23BQ9NYZ1 205 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 KCNG2Q9UJ96 466 aa9.94□□□□□ -0.82
AC004540.1-204ENST00000449537 IRGMA1A4Y4 181 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 ANKRD30BLA7E2S9 258 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 PGA5P0DJD9 388 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 EPHA2P29317 976 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 OR3A4PP47883 348 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 ENTPD1P49961 510 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 RPL31P62899 125 aaKnown RBP9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 CRMP1Q14194 572 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 RBM48Q5RL73 367 aaKnown RBP9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 FAM27D1Q5T7N8 215 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 PTCHD4Q6ZW05 846 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 SLC37A3Q8NCC5 494 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 OR56B2PQ8NGI1 322 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 OR13D1Q8NGV5 346 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 OR4K13Q8NH42 304 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 OR2AE1Q8NHA4 323 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 NMNAT3Q96T66 252 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 MYCBPQ99417 103 aaPredicted RBP9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 ATF6BQ99941 703 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 NMNAT2Q9BZQ4 307 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 SYT4Q9H2B2 425 aa9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.93□□□□□ -0.82
AC004540.1-204ENST00000449537 SH2D7A6NKC9 451 aaPredicted RBP9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 OR2AT4A6NND4 320 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 ODF3BA8MYP8 253 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 LY6G6CO95867 125 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 HCKP08631 526 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 CCL3L1P16619 93 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 INSL3P51460 131 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 CAPZA1P52907 286 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 EFNB1P98172 346 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 DYNC1I2Q13409 638 aaKnown RBP9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 MEP1BQ16820 701 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 SNAI3Q3KNW1 292 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 GLYATL3Q5SZD4 288 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 SLC35F1Q5T1Q4 408 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 ZNF626Q68DY1 528 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 PROKR2Q8NFJ6 384 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 OR10Z1Q8NGY1 313 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 LINC00476Q8WZB0 136 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 MNTQ99583 582 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 SLC25A33Q9BSK2 321 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 RPRD1BQ9NQG5 326 aaKnown RBP9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 CLN6Q9NWW5 311 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 SCN3BQ9NY72 215 aa9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 H2AFY2Q9P0M6 372 aaPredicted RBP9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 WARS2Q9UGM6 360 aaKnown RBP9.92□□□□□ -0.82
AC004540.1-204ENST00000449537 A0A087WXM4 84 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 OR6C68A6NDL8 312 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 AKR7A2O43488 359 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 PRKYO43930 277 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 AMY1AP04745 511 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 AMY2AP04746 511 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 SPI1P17947 270 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 GABRB1P18505 474 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 POLR2IP36954 125 aaKnown RBP9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 GNALP38405 381 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 DDOSTP39656 456 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 CDKN2AP42771 156 aaKnown RBP9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 GABARAPL2P60520 117 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 CXCR4P61073 352 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 TMEM236Q5W0B7 351 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 ENTHD1Q8IYW4 607 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 TCEANCQ8N8B7 351 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 CYB561A3Q8NBI2 242 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 TSPAN14Q8NG11 270 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 OR11H6Q8NGC7 330 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 OR2AJ1Q8NGZ0 328 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 OR8U1Q8NH10 309 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 RHOXF1Q8NHV9 184 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 CHPT1Q8WUD6 406 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 FBLIM1Q8WUP2 373 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 RNFT2Q96EX2 444 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 IL4I1Q96RQ9 567 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 TLNRD1Q9H1K6 362 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 NLKQ9UBE8 527 aa9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 PLECQ15149 4684 aaKnown RBP9.91□□□□□ -0.82
AC004540.1-204ENST00000449537 KIAA1109Q2LD37 5005 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms