RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 V9GYS6 101 aa10.72□□□□□ -0.69
HMGB3-204ENST00000448905 ODF3BA8MYP8 253 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 CYB5AP00167 134 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 PF4V1P10720 104 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 PEX2P28328 305 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 BRS3P32247 399 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 FUT6P51993 359 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 CRISP1P54107 249 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 CXCR4P61073 352 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 ERVK11-1P61568 191 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 ACTA2P62736 377 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 BLCAPP62952 87 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 ACTG2P63267 376 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 ACTC1P68032 377 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 ACTA1P68133 377 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 MEPCEQ7L2J0 689 aaKnown RBP10.71□□□□□ -0.69
HMGB3-204ENST00000448905 TMEM179BQ7Z7N9 219 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 ADGRG5Q8IZF4 528 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 OR8H2Q8N162 312 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 DYNAPQ8N1N2 210 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 ZNF676Q8N7Q3 588 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 CCDC54Q8NEL0 328 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 OR14K1Q8NGZ2 314 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 PHF21AQ96BD5 680 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 CEP19Q96LK0 163 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 APOL4Q9BPW4 351 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
HMGB3-204ENST00000448905 PAPOLBQ9NRJ5 636 aaKnown RBP10.71□□□□□ -0.69
HMGB3-204ENST00000448905 AURKAIP1Q9NWT8 199 aaPredicted RBP10.71□□□□□ -0.69
HMGB3-204ENST00000448905 GATBO75879 557 aaKnown RBP10.7□□□□□ -0.7
HMGB3-204ENST00000448905 CLIC3O95833 236 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 KRT8P05787 483 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 HTR1DP28221 377 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 DLX6P56179 175 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 PTGES3Q15185 160 aaKnown RBP10.7□□□□□ -0.7
HMGB3-204ENST00000448905 DEFB121Q5J5C9 76 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 FOXB2Q5VYV0 432 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 OR52W1Q6IF63 320 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 C16orf82Q7Z2V1 217 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 SLC35F2Q8IXU6 374 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 Q8IYB0 196 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 BATF2Q8N1L9 274 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 NRBF2Q96F24 287 aa10.7□□□□□ -0.7
HMGB3-204ENST00000448905 SEBOXQ9HB31 216 aaPredicted RBP10.7□□□□□ -0.7
HMGB3-204ENST00000448905 TET2Q6N021 2002 aaPredicted RBP10.69□□□□□ -0.7
HMGB3-204ENST00000448905 A0A1B0GTI1 187 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 A0A1W2PRX2 142 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 TCRBV4S1A1TA0A5B7 111 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 FUOMA2VDF0 154 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 A6NIN4 97 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 SYT7O43581 403 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 DUS4LO95620 317 aaKnown RBP10.69□□□□□ -0.7
HMGB3-204ENST00000448905 PF4P02776 101 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 GABRR1P24046 479 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 CD83Q01151 205 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 MFGE8Q08431 387 aaPredicted RBP10.69□□□□□ -0.7
HMGB3-204ENST00000448905 EDDM3AQ14507 147 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 VAX1Q5SQQ9 334 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 SPATA24Q86W54 205 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 YIPF7Q8N8F6 280 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 TRMT10AQ8TBZ6 339 aaKnown RBP10.69□□□□□ -0.7
HMGB3-204ENST00000448905 CREB3L1Q96BA8 519 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 BORCS8Q96FH0 119 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 CLEC7AQ9BXN2 247 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 TTTY10Q9BZA0 68 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 TMEM133Q9H2Q1 129 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 CLN6Q9NWW5 311 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 MTCH1Q9NZJ7 389 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 COPS3Q9UNS2 423 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 TSSC4Q9Y5U2 329 aaPredicted RBP10.69□□□□□ -0.7
HMGB3-204ENST00000448905 LINC00312Q9Y6C7 94 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 SESN1Q9Y6P5 492 aa10.69□□□□□ -0.7
HMGB3-204ENST00000448905 CCDC182A6NF36 153 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 FAM90A22PA8MWA6 464 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 ZNF737O75373 536 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 SRSF10O75494 262 aaKnown RBP10.68□□□□□ -0.7
HMGB3-204ENST00000448905 INMTO95050 263 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 MPIG6BO95866 241 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 IGLL1P15814 213 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 ATP6V1E1P36543 226 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 ATP1B3P54709 279 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 SLC35A2P78381 396 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 GRK1Q15835 563 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 NXNL2Q5VZ03 156 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 Q6ZSR3 168 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 SLC25A26Q70HW3 274 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 TRAPPC6BQ86SZ2 158 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 RTN4RL2Q86UN3 420 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 HS3ST5Q8IZT8 346 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 OR4X2Q8NGF9 303 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 ZNF596Q8TC21 504 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 WIPF2Q8TF74 440 aaPredicted RBP10.68□□□□□ -0.7
HMGB3-204ENST00000448905 C10orf35Q96D05 121 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 RCC1LQ96I51 464 aaKnown RBP10.68□□□□□ -0.7
HMGB3-204ENST00000448905 OCSTAMPQ9BR26 566 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 DPM3Q9P2X0 92 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 PCDHGB5Q9Y5G0 923 aa10.68□□□□□ -0.7
HMGB3-204ENST00000448905 IGHV2-26A0A0B4J1V2 119 aa10.67□□□□□ -0.7
HMGB3-204ENST00000448905 MEX3AA1L020 520 aaKnown RBP10.67□□□□□ -0.7
HMGB3-204ENST00000448905 ADARB2-AS1A8MUL3 147 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms