RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 TRMT61AQ96FX7 289 aaKnown RBP8.05□□□□□ -1.12
NIPBL-202ENST00000448238 A0A0U1RQF3 1178 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 GPNMBQ14956 572 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 C17orf51A8MQB3 221 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 SDCBPO00560 298 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-202ENST00000448238 SCRG1O75711 98 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 ROM1Q03395 351 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 MRGPRDQ8TDS7 321 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 TMEM38AQ9H6F2 299 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 FBXO4Q9UKT5 387 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 CLTCL1P53675 1640 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 INHBBP09529 407 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 PRSS56P0CW18 603 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 C12orf49Q9H741 205 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 ELF5Q9UKW6 265 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-202ENST00000448238 MMP17Q9ULZ9 603 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 LRRK1Q38SD2 2015 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 TMEM88BA6NKF7 163 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 ALOX12BO75342 701 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 AKR7A3O95154 331 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 HAAOP46952 286 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 NARFLQ9H6Q4 476 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 TRAV8-2A0A0B4J237 113 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 GPX3P22352 226 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SLC19A1P41440 591 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 MVDP53602 400 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 IL17AQ16552 155 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 BTLAQ7Z6A9 289 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SPICQ8N5J4 248 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 GPR84Q9NQS5 396 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 IGSF5Q9NSI5 407 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SLAMF8Q9P0V8 285 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SPCS1Q9Y6A9 102 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 NUP153P49790 1475 aaKnown RBP8.04□□□□□ -1.12
NIPBL-202ENST00000448238 TRBV7-9A0A0J9YWB2 115 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 UPK1AO00322 258 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 HOXC13P31276 330 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 RPS20P60866 119 aaKnown RBP8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SUMO2P61956 95 aaKnown RBP8.04□□□□□ -1.12
NIPBL-202ENST00000448238 LRRC75BQ2VPJ9 315 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 STAC2Q6ZMT1 411 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 OR1K1Q8NGR3 316 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 OR10AC1Q8NH08 325 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 BEX4Q9NWD9 120 aaPredicted RBP8.04□□□□□ -1.12
NIPBL-202ENST00000448238 PHLDA3Q9Y5J5 127 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 C1orf105O95561 183 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SHISA6Q6ZSJ9 500 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 IRF2BP1Q8IU81 584 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 FBXL14Q8N1E6 418 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 NANOGP1Q8N7R0 232 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 DOK4Q8TEW6 326 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 WNT5BQ9H1J7 359 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 PROCRQ9UNN8 238 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 TULP4Q9NRJ4 1543 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 LOC389332A0A1B0GUA5 103 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 FUT3P21217 361 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SMAD2Q15796 467 aaKnown RBP8.04□□□□□ -1.12
NIPBL-202ENST00000448238 EBLN2Q6P2I7 272 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SLC25A42Q86VD7 318 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 NUDCD2Q8WVJ2 157 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 ORAI1Q96D31 301 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 TRAV1-2A0A0B4J238 106 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SOCS7O14512 581 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 KBTBD11O94819 623 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SLC2A10O95528 541 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 PRSS12P56730 875 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 HFEQ30201 348 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 MED25Q71SY5 747 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 LSM10Q969L4 123 aaKnown RBP8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SPSB1Q96BD6 273 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SARAFQ96BY9 339 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 HCRTR1O43613 425 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 CA1P00915 261 aaPredicted RBP8.04□□□□□ -1.12
NIPBL-202ENST00000448238 OPN1LWP04000 364 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 ZFAND6Q6FIF0 208 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 OR2C3Q8N628 320 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 SIGMAR1Q99720 223 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 PBRM1Q86U86 1689 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 H3BRM9 83 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 RACK1P63244 317 aaKnown RBP8.04□□□□□ -1.12
NIPBL-202ENST00000448238 DDB2Q92466 427 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 TXNDC17Q9BRA2 123 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 CA10Q9NS85 328 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 WIPI2Q9Y4P8 454 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 GVINP1Q7Z2Y8 2422 aa8.04□□□□□ -1.12
NIPBL-202ENST00000448238 HECW2Q9P2P5 1572 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 IER3P46695 156 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 CSNK1DP48730 415 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 CSNK1EP49674 416 aaKnown RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 DACT2Q5SW24 774 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 IER5LQ5T953 404 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 PRKRAO75569 313 aaKnown RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 CD74P04233 296 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 OR4A8P0C604 315 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 KCNAB1Q14722 419 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 RGS7BPQ6MZT1 257 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-202ENST00000448238 LRRC75AQ8NAA5 344 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 OR10V1Q8NGI7 309 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 NRIP2Q9BQI9 281 aa8.03□□□□□ -1.12
NIPBL-202ENST00000448238 DERL1Q9BUN8 251 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms