RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 CLDN34H7C241 214 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 GNAO1P09471 354 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 ACTG1P63261 375 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 BLMHQ13867 455 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 DEFB112Q30KQ8 113 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 BATF2Q8N1L9 274 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 PARP16Q8N5Y8 322 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 Q8N7P7 452 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 TBC1D15Q8TC07 691 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 SEBOXQ9HB31 216 aaPredicted RBP15.32■□□□□ 0.04
CCDC188-202ENST00000444532 NOX4Q9NPH5 578 aa15.32■□□□□ 0.04
CCDC188-202ENST00000444532 CHCHD3Q9NX63 227 aaKnown RBP15.32■□□□□ 0.04
CCDC188-202ENST00000444532 TMEM89A2RUT3 159 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 F8VVB4 439 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 F8VWA3 439 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 TK1P04183 234 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 CHRM2P08172 466 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 PIPP12273 146 aaPredicted RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 CEBPDP49716 269 aaPredicted RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 GTF2A1P52655 376 aaPredicted RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 GUCA2AQ02747 115 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 PDZK1IP1Q13113 114 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 OR2G6Q5TZ20 316 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 RUSC1-AS1Q66K80 236 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 OR13C9Q8NGT0 318 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 RPS4Y2Q8TD47 263 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 FBLIM1Q8WUP2 373 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 GGHQ92820 318 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 GCDHQ92947 438 aaPredicted RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 ZDHHC16Q969W1 377 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 SLC25A28Q96A46 364 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 C1orf147Q96MC9 270 aaPredicted RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 METTL8Q9H825 291 aaKnown RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 UNKLQ9H9P5 680 aaKnown RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 ELL3Q9HB65 397 aaPredicted RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 PLCXD1Q9NUJ7 323 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 BABAM2Q9NXR7 383 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 CNOT2Q9NZN8 540 aaKnown RBP15.31■□□□□ 0.04
CCDC188-202ENST00000444532 DHDHQ9UQ10 334 aa15.31■□□□□ 0.04
CCDC188-202ENST00000444532 A0A1W2PPH5 198 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 EFCAB10A6NFE3 127 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 K7N7A8 449 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 OGG1O15527 345 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 POU3F4P49335 361 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 RPL31P62899 125 aaKnown RBP15.3■□□□□ 0.04
CCDC188-202ENST00000444532 ST3GAL4Q11206 333 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 CDK5R1Q15078 307 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 SLC9A3R2Q15599 337 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 FIP1L1Q6UN15 594 aaKnown RBP15.3■□□□□ 0.04
CCDC188-202ENST00000444532 Q6YL49 198 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 OR52N1Q8NH53 320 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 TSEN15Q8WW01 171 aaKnown RBP15.3■□□□□ 0.04
CCDC188-202ENST00000444532 TFAP2CQ92754 450 aa15.3■□□□□ 0.04
CCDC188-202ENST00000444532 EMG1Q92979 244 aaKnown RBP15.3■□□□□ 0.04
CCDC188-202ENST00000444532 MDFIC2A0A1B0GVS7 189 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 H0YJX3 145 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 SULT1B1O43704 296 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 INMTO95050 263 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 RNASE1P07998 156 aaKnown RBP15.29■□□□□ 0.04
CCDC188-202ENST00000444532 COMPP49747 757 aaPredicted RBP15.29■□□□□ 0.04
CCDC188-202ENST00000444532 COL10A1Q03692 680 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 NCR3LG1Q68D85 454 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 XAF1Q6GPH4 301 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 LAIR2Q6ISS4 152 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 SAXO1Q8IYX7 474 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 FAM185AQ8N0U4 392 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 FAM58AQ8N1B3 248 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 OR5D13Q8NGL4 314 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 GPR148Q8TDV2 347 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 NRG4Q8WWG1 115 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 DUX5Q96PT3 197 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 RHOFQ9HBH0 211 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 SIRT7Q9NRC8 400 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 C19orf12Q9NSK7 152 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 CLEC2DQ9UHP7 191 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 PSORS1C1Q9UIG5 152 aa15.29■□□□□ 0.04
CCDC188-202ENST00000444532 SPRY1O43609 319 aaPredicted RBP15.28■□□□□ 0.04
CCDC188-202ENST00000444532 CD2P06729 351 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 BCL3P20749 454 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 EEF1B2P24534 225 aaKnown RBP15.28■□□□□ 0.04
CCDC188-202ENST00000444532 NPBWR2P48146 333 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 ZNF146Q15072 292 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 SPIN3Q5JUX0 258 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 TMEM200BQ69YZ2 307 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 C12orf54Q6X4T0 127 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 PDZD9Q8IXQ8 264 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 ASCC1Q8N9N2 400 aaKnown RBP15.28■□□□□ 0.04
CCDC188-202ENST00000444532 TNFRSF14Q92956 283 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 RFT1Q96AA3 541 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 SPACA5Q96QH8 159 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 RBFOX1Q9NWB1 397 aaKnown RBP15.28■□□□□ 0.04
CCDC188-202ENST00000444532 GLS2Q9UI32 602 aa15.28■□□□□ 0.04
CCDC188-202ENST00000444532 RNASEK-C17orf49H0YIS7 233 aa15.27■□□□□ 0.04
CCDC188-202ENST00000444532 HOXA3O43365 443 aaPredicted RBP15.27■□□□□ 0.04
CCDC188-202ENST00000444532 RRP9O43818 475 aaKnown RBP15.27■□□□□ 0.04
CCDC188-202ENST00000444532 XPNPEP2O43895 674 aa15.27■□□□□ 0.04
CCDC188-202ENST00000444532 ZNF737O75373 536 aa15.27■□□□□ 0.04
CCDC188-202ENST00000444532 KDM4BO94953 1096 aa15.27■□□□□ 0.04
CCDC188-202ENST00000444532 HCKP08631 526 aa15.27■□□□□ 0.04
CCDC188-202ENST00000444532 UBE2E1P51965 193 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms