RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 CDK2P24941 298 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 IL12BP29460 328 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 MAS1LP35410 378 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ARR3P36575 388 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 WNT3AP56704 352 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 PIGPP57054 158 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ERVS71-1P61550 626 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ADIGQ0VDE8 80 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 IL10RAQ13651 578 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 RAB35Q15286 201 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ADIRFQ15847 76 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 C9orf57Q5W0N0 161 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ASPHD2Q6ICH7 369 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 LCN10Q6JVE6 187 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 TRNP1Q6NT89 227 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 GUSBP11Q6P575 273 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 LEG1Q6P5S2 330 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 PRSS57Q6UWY2 283 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 BAGE3Q86Y29 109 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 BAGE2Q86Y30 109 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 H1FOOQ8IZA3 346 aaPredicted RBP2.47□□□□□ -2.01
LIG4-203ENST00000442234 ZNF101Q8IZC7 436 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 DEFB106AQ8N104 65 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 SMIM20Q8N5G0 67 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 C1orf127Q8N9H9 656 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 OR4K1Q8NGD4 311 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 OR4X1Q8NH49 305 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 CMTM2Q8TAZ6 248 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 PATE1Q8WXA2 126 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 LENG9Q96B70 501 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ELSPBP1Q96BH3 223 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 OR10C1Q96KK4 312 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 FAM103A1Q9BTL3 118 aaKnown RBP2.47□□□□□ -2.01
LIG4-203ENST00000442234 PKIBQ9C010 78 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 VCX2Q9H322 139 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 FGF20Q9NP95 211 aaPredicted RBP2.47□□□□□ -2.01
LIG4-203ENST00000442234 NGBQ9NPG2 151 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 YAE1D1Q9NRH1 226 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 ACER3Q9NUN7 267 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 TMEM100Q9NV29 134 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 OR1A2Q9Y585 309 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 WSB1Q9Y6I7 421 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 KIF26BQ2KJY2 2108 aa2.47□□□□□ -2.01
LIG4-203ENST00000442234 IGLV3-22A0A075B6J6 115 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZNF736B4DX44 427 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZNF749O43361 778 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SAP30O75446 220 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ONECUT2O95948 504 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CD8AP01732 235 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 STATHP02808 62 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 GBAP04062 536 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 ZNF20P17024 532 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 TCN2P20062 427 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 FUT3P21217 361 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 HNRNPA2B1P22626 353 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 CD38P28907 300 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 HBA1P69905 142 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SLC35A1P78382 337 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 HLA-DRB3P79483 266 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PMP22Q01453 160 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 AESQ08117 197 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PMPCAQ10713 525 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 RGNQ15493 299 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SYPL1Q16563 259 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 HIST3H3Q16695 136 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PMS2CLQ68D20 193 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 LINC00114Q6XXX2 140 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 TMEM184AQ6ZMB5 413 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 FRRS1Q6ZNA5 592 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SLC25A26Q70HW3 274 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PARS2Q7L3T8 475 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 SCD5Q86SK9 330 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MEX3DQ86XN8 651 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 FAM58AQ8N1B3 248 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SLC38A9Q8NBW4 561 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR52L1Q8NGH7 329 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 OR5AK3PQ8NH89 298 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CXorf40AQ8TE69 158 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 CRYGNQ8WXF5 182 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 NEIL2Q969S2 332 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 FAM46BQ96A09 425 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 TMEM45BQ96B21 275 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 SEH1LQ96EE3 360 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 C20orf144Q9BQM9 153 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PIMREGQ9BSJ6 248 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 MS4A8Q9BY19 250 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 LPAR5Q9H1C0 372 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 FAM124BQ9H5Z6 455 aaPredicted RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 TMEM140Q9NV12 185 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 NUDT4Q9NZJ9 180 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 WASHC3Q9Y3C0 194 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 LSM5Q9Y4Y9 91 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 YLPM1P49750 1951 aaKnown RBP2.46□□□□□ -2.02
LIG4-203ENST00000442234 OTOFQ9HC10 1997 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 UPK3BL1B0FP48 263 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 UPK3BL2E5RIL1 263 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 M0R1X1 148 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 TM4SF5O14894 197 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 P2RX6O15547 441 aa2.46□□□□□ -2.02
LIG4-203ENST00000442234 PIRTP0C851 137 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms