RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 H3BUX3 64 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 K7N7A8 449 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 PSMD9O00233 223 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 MPZP25189 248 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 MRPL28Q13084 256 aaKnown RBP6.34□□□□□ -1.39
CD44-211ENST00000442151 IL18R1Q13478 541 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 MINOS1Q5TGZ0 78 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 C1orf146Q5VVC0 180 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 TMEM200BQ69YZ2 307 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 KDM4DQ6B0I6 523 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 SLC35E4Q6ICL7 350 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 HS3ST5Q8IZT8 346 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 OR4S1Q8NGB4 309 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 RPS4Y2Q8TD47 263 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 SEH1LQ96EE3 360 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 CPNE2Q96FN4 548 aaPredicted RBP6.34□□□□□ -1.39
CD44-211ENST00000442151 CENPNQ96H22 339 aaPredicted RBP6.34□□□□□ -1.39
CD44-211ENST00000442151 CEP19Q96LK0 163 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 NRIP2Q9BQI9 281 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 PRSS22Q9GZN4 317 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 GABARAPL1Q9H0R8 117 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 IMPAD1Q9NX62 359 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 OR14J1Q9UGF5 321 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 MINOS1-NBL1R4GNA1 71 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 A0A1B0GW55 424 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 C17orf98A8MV24 154 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 RPP14O95059 124 aaKnown RBP6.34□□□□□ -1.4
CD44-211ENST00000442151 DUX4L2P0CJ85 424 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 DUX4L3P0CJ86 424 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 DUX4L4P0CJ87 422 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 DUX4L5P0CJ88 424 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 DUX4L6P0CJ89 424 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 DUX4L7P0CJ90 424 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 ZNF728P0DKX0 622 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 ZNF20P17024 532 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 CCL1P22362 96 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 AZGP1P25311 298 aaKnown RBP6.34□□□□□ -1.4
CD44-211ENST00000442151 RBP2P50120 134 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 BMXP51813 675 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 EFNB1P98172 346 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 HOXA4Q00056 320 aaPredicted RBP6.34□□□□□ -1.4
CD44-211ENST00000442151 BNIP1Q12981 228 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.4
CD44-211ENST00000442151 DUX4L9Q6RFH8 374 aaPredicted RBP6.34□□□□□ -1.4
CD44-211ENST00000442151 RTN4RL2Q86UN3 420 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 ASCC1Q8N9N2 400 aaKnown RBP6.34□□□□□ -1.4
CD44-211ENST00000442151 PPP1R14AQ96A00 147 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 SLC7A6OSQ96CW6 309 aaPredicted RBP6.34□□□□□ -1.4
CD44-211ENST00000442151 AJUBAQ96IF1 538 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 AKR1E2Q96JD6 320 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 Q96MT0 163 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 PPP1R3EQ9H7J1 279 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 ADGRL4Q9HBW9 690 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 HES4Q9HCC6 221 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 DUX4Q9UBX2 424 aa6.34□□□□□ -1.4
CD44-211ENST00000442151 VGLL3A8MV65 326 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 SH2D1BO14796 132 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 MPZL2O60487 215 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 FCN3O75636 299 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 SELLP14151 372 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 ANOS1P23352 680 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 BRS3P32247 399 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 KLRD1Q13241 179 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 LHFPL2Q6ZUX7 228 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 C16orf82Q7Z2V1 217 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 REC114Q7Z4M0 266 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 CATSPERDQ86XM0 798 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 PNKDQ8N490 385 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 CD177Q8N6Q3 437 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 OR10H4Q8NGA5 316 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 SPSB1Q96BD6 273 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 ZNF714Q96N38 554 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 CADM1Q9BY67 442 aaKnown RBP6.33□□□□□ -1.4
CD44-211ENST00000442151 MRM2Q9UI43 246 aaKnown RBP6.33□□□□□ -1.4
CD44-211ENST00000442151 COPS3Q9UNS2 423 aa6.33□□□□□ -1.4
CD44-211ENST00000442151 UBE2J1Q9Y385 318 aaPredicted RBP6.33□□□□□ -1.4
CD44-211ENST00000442151 A0A1B0GTI1 187 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 MGST3O14880 152 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 SYNGR1O43759 233 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 XPNPEP2O43895 674 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 SRSF10O75494 262 aaKnown RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 ARG1P05089 322 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 CEACAM3P40198 252 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 DYNLT3P51808 116 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 MTCP1P56278 107 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 EDDM3BP56851 147 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ERVK11-1P61568 191 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ACTA2P62736 377 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ACTG2P63267 376 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 ELF3P78545 371 aaPredicted RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 COL10A1Q03692 680 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 MFGE8Q08431 387 aaPredicted RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 DYNC1I2Q13409 638 aaKnown RBP6.32□□□□□ -1.4
CD44-211ENST00000442151 FAM189A2Q15884 450 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 SPIN3Q5JUX0 258 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 UTS2BQ765I0 119 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 OR8H2Q8N162 312 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 FGFRL1Q8N441 504 aa6.32□□□□□ -1.4
CD44-211ENST00000442151 OR11H6Q8NGC7 330 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms