RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SPTBN5Q9NRC6 3674 aaKnown RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 XIRP2A4UGR9 3374 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 IGKV1-27A0A075B6S5 117 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 MEIKINA0A087WXM9 373 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 IGHV2OR16-5A0A0B4J2B6 119 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 KIR2DS1A0A191URI9 304 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 FAM172BPA6NC97 362 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 C16orf97H3BN30 126 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 SLC34A2O95436 690 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 GIPP09681 153 aaPredicted RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 PRKACAP17612 351 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ANXA7P20073 488 aaKnown RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 KITLGP21583 273 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 FPR2P25090 351 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 MDH2P40926 338 aaKnown RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 KIR2DS4P43632 304 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ZNF83P51522 516 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 TDGF1P3P51864 188 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 GMFBP60983 142 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 HERV-K104P61576 105 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 KIR2DS1Q14954 304 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 TSC22D1Q15714 1073 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 TMEM255AQ5JRV8 349 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 UXS1Q8NBZ7 420 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 OR5AP2Q8NGF4 316 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 HPSE2Q8WWQ2 592 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ZNF486Q96H40 463 aaPredicted RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 DHRS9Q9BPW9 319 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 SEC22CQ9BRL7 303 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 TMEM8BA6NDV4 472 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 A6NLC8 198 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 FOXI3A8MTJ6 420 aaPredicted RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 DIRAS3O95661 229 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 CELA3BP08861 270 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 BCL3P20749 454 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 BMP5P22003 454 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 TNFSF4P23510 183 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 CD34P28906 385 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 S100GP29377 79 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 NAAAQ02083 359 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 MPPED2Q15777 294 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 DMRTC1Q5HYR2 192 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ALKBH2Q6NS38 261 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 SEM1Q6ZVN7 128 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 MOB1BQ7L9L4 216 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 RNF144BQ7Z419 303 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 C6orf201Q7Z4U5 140 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 DOLPP1Q86YN1 238 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 GVQW1Q8N7I0 195 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 OR4S1Q8NGB4 309 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 COQ8AQ8NI60 647 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 KLF14Q8TD94 323 aaPredicted RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 ZCCHC14Q8WYQ9 949 aaKnown RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 FBXW5Q969U6 566 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 PHB2Q99623 299 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 POFUT1Q9H488 388 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 COMMD9Q9P000 198 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ITGB1BP2Q9UKP3 347 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ZNF835Q9Y2P0 537 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 IGHV1-18A0A0C4DH31 117 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 PLSCR5A0PG75 271 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ZNHIT1O43257 154 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 NXPH2O95156 264 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 FAM87AP0C7U9 286 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ZNF735P0CB33 412 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ZNF35P13682 527 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 DNASE1P24855 282 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 GZMKP49863 264 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 MICBQ29980 383 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 MBNL2Q5VZF2 373 aaKnown RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 OR52W1Q6IF63 320 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 TMEM108Q6UXF1 575 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 PPP1R35Q8TAP8 253 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 S100PBPQ96BU1 408 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 SNRNP40Q96DI7 357 aaKnown RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 RADILQ96JH8 1075 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 VKORC1Q9BQB6 163 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ZNF436Q9C0F3 470 aaPredicted RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 OR51I2Q9H344 312 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 AK3Q9UIJ7 227 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 PIGBOS1A0A0B4J2F0 54 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 TRGV8A0A0C4DH27 118 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 IGKV1-12A0A0C4DH73 117 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 A8MXE2 369 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 SH2D1BO14796 132 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 GEMIN2O14893 280 aaKnown RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 DEGS1O15121 323 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 IGKV1D-12P01611 117 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 OR4E1P0C645 316 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 PTAFRP25105 342 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 GLRXP35754 106 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 SRSF7Q16629 238 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS50-205ENST00000441602 PIGYQ3MUY2 71 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ABCA11PQ4W5N1 156 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 ATPAF1Q5TC12 328 aaPredicted RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 ZNF474Q6S9Z5 364 aaPredicted RBP5.16□□□□□ -1.58
VPS50-205ENST00000441602 SEZ6L2Q6UXD5 910 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 SLC36A1Q7Z2H8 476 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 LYG2Q86SG7 212 aa5.16□□□□□ -1.58
VPS50-205ENST00000441602 SLC25A42Q86VD7 318 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms