RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 MRI1Q9BV20 369 aa8.73□□□□□ -1.01
CDC42SE1-202ENST00000439374 FAM212BQ9NTI7 297 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-202ENST00000439374 KPTNQ9Y664 436 aa8.73□□□□□ -1.01
CDC42SE1-202ENST00000439374 A0A1W2PQM1 296 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 SSSCA1O60232 199 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 CSTBP04080 98 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 SLC25A4P12235 298 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 DUSP1P28562 367 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 CX3CR1P49238 355 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 PIGPP57054 158 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 S100A12P80511 92 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 TESK1Q15569 626 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 LPCAT3Q6P1A2 487 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 SLC43A2Q8N370 569 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 SLC22A24Q8N4F4 322 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 C2orf50Q96LR7 162 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 OCSTAMPQ9BR26 566 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 C19orf12Q9NSK7 152 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 MYOTQ9UBF9 498 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 SRPK3Q9UPE1 567 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 MEGF11A6BM72 1044 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 LCATP04180 440 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 OR5AC1P0C628 307 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 CD33P20138 364 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 RAB5CP51148 216 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 HLA-BQ31612 363 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 CATSPERDQ86XM0 798 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 LILRB2Q8N423 598 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 OR14L1PQ8NHC6 308 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 MAFAQ8NHW3 353 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 HLA-CQ95604 372 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 SHDQ96IW2 340 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 PRRX2Q99811 253 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 EDEM2Q9BV94 578 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 LUZP4Q9P127 313 aa8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 CARHSP1Q9Y2V2 147 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-202ENST00000439374 IGKV3D-11A0A0A0MRZ8 115 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 DXOO77932 396 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 CXCL1P09341 107 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 HKR1P10072 659 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 SELLP14151 372 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 FOSL1P15407 271 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 GNRHRP30968 328 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 PTGER4P35408 488 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 CSNK1A1P48729 337 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 ZNF239Q16600 458 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 COL13A1Q5TAT6 717 aaPredicted RBP8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 ZNF385CQ66K41 422 aaPredicted RBP8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 IL34Q6ZMJ4 242 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 CYB561D1Q8N8Q1 229 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 ASB10Q8WXI3 467 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 MVB12AQ96EY5 273 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 GPR173Q9NS66 373 aa8.71□□□□□ -1.01
CDC42SE1-202ENST00000439374 BORCS7-ASMTA0A0B4J1R7 106 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 EFNA2O43921 213 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 SFT2D2O95562 160 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 TTRP02766 147 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 CD79AP11912 226 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF708P17019 499 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 HNF1AP20823 631 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 CHATP28329 748 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 ELLP55199 621 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 RHEBQ15382 184 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 C15orf54Q8N8G6 183 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR52M1Q8NGK5 317 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 ADAMTS17Q8TE56 1095 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 SLC5A7Q9GZV3 580 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 B3GALT5Q9Y2C3 310 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 KLF2Q9Y5W3 355 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 PRR14LQ5THK1 2151 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 A0A0A6YYD4 124 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 C9J4A7 227 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 YKT6O15498 198 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 HEXAP06865 529 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 PET100P0DJ07 73 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 PGA4P0DJD7 388 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 PGA5P0DJD9 388 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 SUPT4H1P63272 117 aaKnown RBP8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF519Q8TB69 540 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 TMEM37Q8WXS4 190 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 RAB39BQ96DA2 213 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 ALKBH3Q96Q83 286 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 MSL2Q9HCI7 577 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 LRFN1Q9P244 771 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 AK3Q9UIJ7 227 aa8.71□□□□□ -1.02
CDC42SE1-202ENST00000439374 TNFSF11O14788 317 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 EDN3P14138 238 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 PRF1P14222 555 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 APLNRP35414 380 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 APOBEC1P41238 236 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 IDH3GP51553 393 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 EIF5AP63241 154 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 PPA1Q15181 289 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 NSUN5P2Q63ZY6 315 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 MISP3Q96FF7 219 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 CMTM3Q96MX0 182 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF385AQ96PM9 386 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 RASL10BQ96S79 203 aa8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 UTP23Q9BRU9 249 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-202ENST00000439374 PMS2P1A4D2B8 440 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms