RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GUCA2AQ02747 115 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 DEFB112Q30KQ8 113 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 RUSC1-AS1Q66K80 236 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 RPL22L1Q6P5R6 122 aaKnown RBP20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 SERPINA12Q8IW75 414 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 OR5D14Q8NGL3 314 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 OR13C9Q8NGT0 318 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 TSEN15Q8WW01 171 aaKnown RBP20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 TMEM80Q96HE8 168 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 FAM234AQ9H0X4 552 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 PRDM13Q9H4Q3 707 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 ZCCHC4Q9H5U6 513 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 NOX4Q9NPH5 578 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 A0A1W2PPH5 198 aa20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 CEBPDP49716 269 aaPredicted RBP20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 SLC34A1Q06495 639 aa20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 TBC1D15Q8TC07 691 aa20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 EMG1Q92979 244 aaKnown RBP20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 METTL8Q9H825 291 aaKnown RBP20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 ELL3Q9HB65 397 aaPredicted RBP20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 SIRT7Q9NRC8 400 aa20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 SOX21Q9Y651 276 aaPredicted RBP20.34■□□□□ 0.85
RAPGEF1-206ENST00000438647 EFCAB10A6NFE3 127 aa20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 ALX3O95076 343 aa20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 RNASE1P07998 156 aaKnown RBP20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 CHRM2P08172 466 aa20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 RPL31P62899 125 aaKnown RBP20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 C12orf54Q6X4T0 127 aa20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 FAM185AQ8N0U4 392 aa20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 PARP16Q8N5Y8 322 aa20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 C1orf147Q96MC9 270 aaPredicted RBP20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 DUX5Q96PT3 197 aa20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 UNKLQ9H9P5 680 aaKnown RBP20.33■□□□□ 0.85
RAPGEF1-206ENST00000438647 MDFIC2A0A1B0GVS7 189 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 TMEM89A2RUT3 159 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 INMTO95050 263 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 TK1P04183 234 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 GNAO1P09471 354 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 PIPP12273 146 aaPredicted RBP20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 EEF1B2P24534 225 aaKnown RBP20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 GTF2A1P52655 376 aaPredicted RBP20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 PDZK1IP1Q13113 114 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 CDK5R1Q15078 307 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 SLC9A3R2Q15599 337 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 OR2G6Q5TZ20 316 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 NCR3LG1Q68D85 454 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 Q8N7P7 452 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 ASCC1Q8N9N2 400 aaKnown RBP20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 OR5D13Q8NGL4 314 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 CPNE2Q96FN4 548 aaPredicted RBP20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 BABAM2Q9NXR7 383 aa20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 CNOT2Q9NZN8 540 aaKnown RBP20.32■□□□□ 0.84
RAPGEF1-206ENST00000438647 F8VVB4 439 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 F8VWA3 439 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 K7N7A8 449 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 SULT1B1O43704 296 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 CD2P06729 351 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 COMPP49747 757 aaPredicted RBP20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 COL10A1Q03692 680 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 PDZD9Q8IXQ8 264 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 FAM58AQ8N1B3 248 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 OR52N1Q8NH53 320 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 GPR148Q8TDV2 347 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 GGHQ92820 318 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 SEBOXQ9HB31 216 aaPredicted RBP20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 C19orf12Q9NSK7 152 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 GLS2Q9UI32 602 aa20.31■□□□□ 0.84
RAPGEF1-206ENST00000438647 HCKP08631 526 aa20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 ST3GAL4Q11206 333 aa20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 Q6YL49 198 aa20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 RPS4Y2Q8TD47 263 aa20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 TFAP2CQ92754 450 aa20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 RFT1Q96AA3 541 aa20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 RHOFQ9HBH0 211 aa20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 RBFOX1Q9NWB1 397 aaKnown RBP20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 NKX1-2Q9UD57 310 aaPredicted RBP20.3■□□□□ 0.84
RAPGEF1-206ENST00000438647 hCG_1809904A0A1W2PP81 198 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 A0A1W2PPE2 198 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 A0A1W2PR64 198 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 A0A1W2PRV1 198 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 HOXA3O43365 443 aaPredicted RBP20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 SPRY1O43609 319 aaPredicted RBP20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 BCL3P20749 454 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 NPBWR2P48146 333 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 SPIN3Q5JUX0 258 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 XAF1Q6GPH4 301 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 SAXO1Q8IYX7 474 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 TMEM86BQ8N661 226 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 FBLIM1Q8WUP2 373 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 SMIM19Q96E16 107 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 SPACA5Q96QH8 159 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 PLCXD1Q9NUJ7 323 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 CLEC2DQ9UHP7 191 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 FAM96BQ9Y3D0 163 aa20.29■□□□□ 0.84
RAPGEF1-206ENST00000438647 ERICH4A6NGS2 130 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 RNASEK-C17orf49H0YIS7 233 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 H0YJX3 145 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 MAGEB3O15480 346 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 ZNF737O75373 536 aa20.28■□□□□ 0.84
RAPGEF1-206ENST00000438647 HAND1O96004 215 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms