RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 AGBL5Q8NDL9 886 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 USP3Q9Y6I4 520 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 AKR7A3O95154 331 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 TIMP1P01033 207 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 IQCF3P0C7M6 154 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 HAAOP46952 286 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 CYB561P49447 251 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 DYNLT3P51808 116 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 RAB32Q13637 225 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 ACSM6Q6P461 480 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 NHLRC1Q6VVB1 395 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 WDR34Q96EX3 536 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 IP6K3Q96PC2 410 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 OR4C46A6NHA9 309 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 SLC17A3O00476 420 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 HPXP02790 462 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 ARG1P05089 322 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 C21orf58P58505 322 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 SOX4Q06945 474 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-209ENST00000437951 MYBPHQ13203 477 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 TINAGL1Q9GZM7 467 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-209ENST00000437951 SRD5A3Q9H8P0 318 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 AMMECR1Q9Y4X0 333 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-209ENST00000437951 SPTBN1Q01082 2364 aaKnown RBP10.35□□□□□ -0.75
PTCH1-209ENST00000437951 CTSDP07339 412 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-209ENST00000437951 ZNF121P58317 390 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-209ENST00000437951 RNF165Q6ZSG1 346 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 CBLN2Q8IUK8 224 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 TP53INP2Q8IXH6 220 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 APOBEC3DQ96AK3 386 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-209ENST00000437951 MARCH5Q9NX47 278 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 TJP1Q07157 1748 aa10.35□□□□□ -0.75
PTCH1-209ENST00000437951 SLX4Q8IY92 1834 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 LINC01387J3KSC0 135 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 PLPP1O14494 284 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 PAQR6Q6TCH4 344 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 H1FOOQ8IZA3 346 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 FBXL6Q8N531 539 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 TEX37Q96LM6 180 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 INSM2Q96T92 566 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 LPAR5Q9H1C0 372 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 MYO5AQ9Y4I1 1855 aaKnown RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SOX21Q9Y651 276 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 A0A1B0GX78 115 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 A0A1W2PPC4 97 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 ONECUT2O95948 504 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 DNLZQ5SXM8 178 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 XAF1Q6GPH4 301 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 DEGS2Q6QHC5 323 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SCD5Q86SK9 330 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 BCORP1Q8N888 145 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 MORN4Q8NDC4 146 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 DERL3Q96Q80 235 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 TGIF2-C20orf24A0A0A6YYL0 155 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 LANCL1O43813 399 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 ZNF385CQ66K41 422 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SLC16A11Q8NCK7 471 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 OR8A1Q8NGG7 326 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 ROBO4Q8WZ75 1007 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 ZDHHC16Q969W1 377 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SLC25A22Q9H936 323 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 TRIOBPQ9H2D6 2365 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 IGKV6D-21A0A0A0MT36 114 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 ZC3H12DA2A288 527 aaKnown RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SNURFLB1AK76 121 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 OPN1LWP04000 364 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 CD22P20273 847 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 MRPS21P82921 87 aaKnown RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SLC25A34Q6PIV7 304 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 OTOSQ8NHW6 89 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 OIT3Q8WWZ8 545 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 KTI12Q96EK9 354 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 THOC3Q96J01 351 aaKnown RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 FIZ1Q96SL8 496 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 P2RY12Q9H244 342 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 CA10Q9NS85 328 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 PPT2Q9UMR5 302 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 C5orf49A4QMS7 147 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 PRRG2O14669 202 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 CDKN2AP42771 156 aaKnown RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 NKAIN1Q4KMZ8 207 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 LINC00518Q8N0U6 118 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 FGF14Q92915 247 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 PSG11Q9UQ72 335 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 CICQ96RK0 1608 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 ZNF296Q8WUU4 475 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 MBNL1Q9NR56 388 aaKnown RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 MYO16Q9Y6X6 1858 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 PITX3O75364 302 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SLC37A1P57057 533 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 IZUMO4Q1ZYL8 232 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 Q56UQ5 140 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 ASTLQ6HA08 431 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SGK494Q96LW2 274 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SIGLEC11Q96RL6 698 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 RNF186Q9NXI6 227 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 SLCO1C1Q9NYB5 712 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 UFC1Q9Y3C8 167 aa10.34□□□□□ -0.75
PTCH1-209ENST00000437951 HLA-DQA1P01909 254 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms