RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 C15orf40Q8WUR7 153 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 LRRC29Q8WV35 223 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 IGFBPL1Q8WX77 278 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 S100ZQ8WXG8 99 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 EMG1Q92979 244 aaKnown RBP11.33□□□□□ -0.6
RPE-208ENST00000436630 MARVELD3Q96A59 401 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 S100A16Q96FQ6 103 aaKnown RBP11.33□□□□□ -0.6
RPE-208ENST00000436630 Q96M66 194 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 HES4Q9HCC6 221 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 MYOZ1Q9NP98 299 aaPredicted RBP11.33□□□□□ -0.6
RPE-208ENST00000436630 MTCH1Q9NZJ7 389 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 GLS2Q9UI32 602 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 PLEKHA6Q9Y2H5 1048 aa11.33□□□□□ -0.6
RPE-208ENST00000436630 LRBAP50851 2863 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 FAM25AB3EWG3 89 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 FAM25CB3EWG5 89 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 FAM25GB3EWG6 89 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 CTDSP2O14595 271 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 RHBDL1O75783 438 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 KNG1P01042 644 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 SFTPBP07988 381 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 GLRA1P23415 457 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 PTBP1P26599 531 aaKnown RBP eCLIP11.32□□□□□ -0.61e-7■■■■■ 28.4
RPE-208ENST00000436630 ETV6P41212 452 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 NR4A2P43354 598 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 HFEQ30201 348 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 METAP1DQ6UB28 335 aaPredicted RBP11.32□□□□□ -0.6
RPE-208ENST00000436630 TMEM104Q8NE00 496 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 OR56B1Q8NGI3 324 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 SELENOIQ9C0D9 397 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 SPACA1Q9HBV2 294 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 HMG20AQ9NP66 347 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 DIABLOQ9NR28 239 aa11.32□□□□□ -0.6
RPE-208ENST00000436630 RBFOX1Q9NWB1 397 aaKnown RBP11.32□□□□□ -0.6
RPE-208ENST00000436630 FLNBO75369 2602 aaKnown RBP11.32□□□□□ -0.6
RPE-208ENST00000436630 FSTL3O95633 263 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 EIF4EP06730 217 aaKnown RBP11.31□□□□□ -0.6
RPE-208ENST00000436630 PRKACAP17612 351 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 MNDAP41218 407 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 NPBWR2P48146 333 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 EFNA4P52798 201 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 ZNF146Q15072 292 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 KCNJ8Q15842 424 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 OR10K2Q6IF99 312 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 CNIH2Q6PI25 160 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 ZNF826PQ6ZT77 177 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 ZCCHC24Q8N2G6 241 aaKnown RBP11.31□□□□□ -0.6
RPE-208ENST00000436630 FAM89BQ8N5H3 189 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 OR10K1Q8NGX5 313 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 RDH5Q92781 318 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 DIRAS2Q96HU8 199 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 TSC22D3Q99576 134 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 LPAR5Q9H1C0 372 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 MIXL1Q9H2W2 232 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 KCNK15Q9H427 330 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 BANF2Q9H503 90 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 IFT22Q9H7X7 185 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 SEBOXQ9HB31 216 aaPredicted RBP11.31□□□□□ -0.6
RPE-208ENST00000436630 BARX1Q9HBU1 254 aaPredicted RBP11.31□□□□□ -0.6
RPE-208ENST00000436630 TMEM106BQ9NUM4 274 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 EXTL2Q9UBQ6 330 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 ST3GAL6Q9Y274 331 aa11.31□□□□□ -0.6
RPE-208ENST00000436630 IGHV3-64DA0A0J9YX35 117 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 A0A1W2PP11 408 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 XRCC3O43542 346 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 LHBP01229 141 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 HPXP02790 462 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 PAX1P15863 534 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 MUC1P15941 1255 aaPredicted RBP11.3□□□□□ -0.6
RPE-208ENST00000436630 ELK1P19419 428 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 TNFSF8P32971 234 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 ZNF45Q02386 682 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 LSAMPQ13449 338 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 TMEM69Q5SWH9 247 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 ACP7Q6ZNF0 438 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 PEG10Q86TG7 708 aaKnown RBP11.3□□□□□ -0.6
RPE-208ENST00000436630 CCDC190Q86UF4 302 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 CMTM4Q8IZR5 234 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 GCSAMQ8N6F7 178 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 GAL3ST1Q99999 423 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 WDR12Q9GZL7 423 aaKnown RBP11.3□□□□□ -0.6
RPE-208ENST00000436630 DNAJB11Q9UBS4 358 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 CRYBG3Q68DQ2 2970 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 AKAP6Q13023 2319 aa11.3□□□□□ -0.6
RPE-208ENST00000436630 TRAV38-1A0A0B4J264 116 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 CLDN25C9JDP6 229 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 F12P00748 615 aaPredicted RBP11.29□□□□□ -0.6
RPE-208ENST00000436630 CSF3P09919 207 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 DAOP14920 347 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 COL8A1P27658 744 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 PMELP40967 661 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 PITPNBP48739 271 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 EFNB2P52799 333 aa11.29□□□□□ -0.6
RPE-208ENST00000436630 MRPS10P82664 201 aaKnown RBP11.29□□□□□ -0.6
RPE-208ENST00000436630 PITPNAQ00169 270 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms