RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PGCP20142 388 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 PRICKLE4Q2TBC4 344 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 FAM58AQ8N1B3 248 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CORO2AQ92828 525 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 FAM122AQ96E09 287 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 RP1P56715 2156 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 LINC01553A4QN01 128 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CLDN34H7C241 214 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 GPR137BO60478 399 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ONECUT2O95948 504 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 S100A7P31151 101 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 TMEM50BP56557 158 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 RAB38P57729 211 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 RPS4XP62701 263 aaKnown RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 SLC7A9P82251 487 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF542PQ5EBM4 170 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 MEX3BQ6ZN04 569 aaKnown RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 CATSPERDQ86XM0 798 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF2Q9BSG1 426 aaPredicted RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 LPAR5Q9H1C0 372 aa6.58□□□□□ -1.36
CPSF6-202ENST00000435070 STRAPQ9Y3F4 350 aaKnown RBP6.58□□□□□ -1.36
CPSF6-202ENST00000435070 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 SERINC4A6NH21 518 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 E5RGE8 158 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 OR3A4PP47883 348 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 MLF1P58340 268 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 TLE3Q04726 772 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 FMODQ06828 376 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 C1orf61Q13536 156 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 ACKR1Q16570 336 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 C1orf100Q5SVJ3 147 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 CST9LP1Q5W188 147 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 LFNGQ8NES3 379 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 ADGRG7Q96K78 797 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 PLEKHA3Q9HB20 300 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 MYOTQ9UBF9 498 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 NSG2Q9Y328 171 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 DOCK11Q5JSL3 2073 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 PLXNA2O75051 1894 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 UNC13CQ8NB66 2214 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 NOVA1P51513 510 aaKnown RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 MRPS11P82912 194 aaKnown RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 H3F3AP84243 136 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 HSF1Q00613 529 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 CD226Q15762 336 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 MAML2Q8IZL2 1156 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 OR52M1Q8NGK5 317 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 BADQ92934 168 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 R3HDM4Q96D70 268 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 RSPRY1Q96DX4 576 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 PLEKHA2Q9HB19 425 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 MRPS28Q9Y2Q9 187 aaKnown RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 A0A1B0GUS0 222 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 K7N7A8 449 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 MGST1P10620 155 aaKnown RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 MPV17LQ2QL34 196 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 ERN2Q76MJ5 926 aaKnown RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 SLC22A24Q8N4F4 322 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 FAM71F1Q96KD3 344 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 TMEM59Q9BXS4 323 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 WNT5BQ9H1J7 359 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 HRASLS2Q9NWW9 162 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 A8MVM7 634 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 NKX2-2O95096 273 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 FGF5P12034 268 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 PAX1P15863 534 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 HIST1H1DP16402 221 aaKnown RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 UCP3P55916 312 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 ERVFC1-1P60608 527 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 EGR4Q05215 589 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 ICAM4Q14773 271 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 OGFOD3Q6PK18 319 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 PRR22Q8IZ63 422 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 OR13D1Q8NGV5 346 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 SDSLQ96GA7 329 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 HDHD3Q9BSH5 251 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 SRPK3Q9UPE1 567 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 IGKV1D-8A0A087WSZ0 117 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 NSG1A0A0A6YYJ2 146 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 RNF212BA8MTL3 300 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 A8MXE2 369 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 K7ERU9 68 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 DUX1O43812 170 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 LMO1P25800 156 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 CEACAM6P40199 344 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 MALLQ13021 153 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 ADIRFQ15847 76 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 C1orf140Q5VVS0 124 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 SPSB3Q6PJ21 355 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 FBXO46Q6PJ61 603 aaPredicted RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 OR51T1Q8NGJ9 327 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 OR5L1Q8NGL2 311 aa6.57□□□□□ -1.36
CPSF6-202ENST00000435070 PHF3Q92576 2039 aaKnown RBP6.57□□□□□ -1.36
CPSF6-202ENST00000435070 A0A1W2PPQ1 181 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 IFNA5P01569 189 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 DLX2Q07687 328 aaPredicted RBP6.56□□□□□ -1.36
CPSF6-202ENST00000435070 DEFB110Q30KQ9 67 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 ZNF774Q6NX45 483 aa6.56□□□□□ -1.36
CPSF6-202ENST00000435070 LCN15Q6UWW0 184 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms