RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 LOC390937A0A1W2PQ73 354 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 TIMM8AO60220 97 aaPredicted RBP10.55□□□□□ -0.72
CLDN4-203ENST00000435050 ACTL6AO96019 429 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 RPA2P15927 270 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 ZNF708P17019 499 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 PIGPP57054 158 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 FOXC1Q12948 553 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 PPA1Q15181 289 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 LTC4SQ16873 150 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 SLC36A1Q7Z2H8 476 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 SH2D2AQ9NP31 389 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 ZNF581Q9P0T4 197 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 TNFSF12O43508 249 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 TK1P04183 234 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 TBPP20226 339 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 BCL3P20749 454 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 FBXW9Q5XUX1 488 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 RTL6Q6ICC9 239 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 SYT3Q9BQG1 590 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 SULT4A1Q9BR01 284 aa10.55□□□□□ -0.72
CLDN4-203ENST00000435050 NUP210LQ5VU65 1888 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 ERVH48-1M5A8F1 160 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 GCH1P30793 250 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 CYCSP99999 105 aaKnown RBP10.54□□□□□ -0.72
CLDN4-203ENST00000435050 PLEKHN1Q494U1 663 aaPredicted RBP10.54□□□□□ -0.72
CLDN4-203ENST00000435050 ZDHHC22Q8N966 263 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 PIEZO2Q9H5I5 2752 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 HSD17B6O14756 317 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 LDLRAD4O15165 306 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 FBXO24O75426 580 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 FUT3P21217 361 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 DEFA5Q01523 94 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 CLEC18BQ6UXF7 455 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 CALHM1Q8IU99 346 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 CDH26Q8IXH8 852 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 ZSCAN4Q8NAM6 433 aaPredicted RBP10.54□□□□□ -0.72
CLDN4-203ENST00000435050 PKDREJQ9NTG1 2253 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 EFSO43281 561 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 RSPO1Q2MKA7 263 aaPredicted RBP10.54□□□□□ -0.72
CLDN4-203ENST00000435050 SLC25A42Q86VD7 318 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 CCDC28AQ8IWP9 274 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 OR5M8Q8NGP6 311 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 OR13G1Q8NGZ3 307 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 ASF1BQ9NVP2 202 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 PIPOXQ9P0Z9 390 aa10.54□□□□□ -0.72
CLDN4-203ENST00000435050 COL6A6A6NMZ7 2263 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 DHRS7CA6NNS2 312 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 MPC2O95563 127 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 IFNA2P01563 188 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 PSMB6P28072 239 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 MPGP29372 298 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 RNFT1Q5M7Z0 435 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 ADGRG7Q96K78 797 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLDN4-203ENST00000435050 B3GNT2Q9NY97 397 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 ANXA10Q9UJ72 324 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 TRAPPC2LQ9UL33 140 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 LHX6Q9UPM6 363 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 V9GYS6 101 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 MFNGO00587 321 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 SCO1O75880 301 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 PRH1P02810 166 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 SWI5Q1ZZU3 235 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 PAN3Q58A45 887 aaKnown RBP10.53□□□□□ -0.72
CLDN4-203ENST00000435050 DBX2Q6ZNG2 339 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 OR10AD1Q8NGE0 317 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 RTN4IP1Q8WWV3 396 aaPredicted RBP10.53□□□□□ -0.72
CLDN4-203ENST00000435050 ESRP2Q9H6T0 727 aaKnown RBP10.53□□□□□ -0.72
CLDN4-203ENST00000435050 RFPL4AA6NLU0 287 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 RFPL4AL1F8VTS6 287 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 AGPAT2O15120 278 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 PDCD6O75340 191 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 H3F3CQ6NXT2 135 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 CCDC54Q8NEL0 328 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 GPHA2Q96T91 129 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 OR2J1Q9GZK6 312 aa10.53□□□□□ -0.72
CLDN4-203ENST00000435050 ZNF71Q9NQZ8 489 aaPredicted RBP10.53□□□□□ -0.72
CLDN4-203ENST00000435050 KIAA2026Q5HYC2 2103 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 SPTAN1Q13813 2472 aaKnown RBP10.52□□□□□ -0.72
CLDN4-203ENST00000435050 H3BUI4 141 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 DEGS1O15121 323 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 APOC3P02656 99 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 SELEP16581 610 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 FPR2P25090 351 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 CAV2P51636 162 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 C11orf87Q6NUJ2 197 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 ZNF695Q8IW36 515 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 OR51H1Q8NH63 302 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 C1orf123Q9NWV4 160 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 SPRR3Q9UBC9 169 aa10.52□□□□□ -0.72
CLDN4-203ENST00000435050 SYNGR1O43759 233 aa10.52□□□□□ -0.73
CLDN4-203ENST00000435050 CRYGSP22914 178 aa10.52□□□□□ -0.73
CLDN4-203ENST00000435050 TNFSF10P50591 281 aa10.52□□□□□ -0.73
CLDN4-203ENST00000435050 ARHGDIBP52566 201 aa10.52□□□□□ -0.73
CLDN4-203ENST00000435050 VAMP2P63027 116 aa10.52□□□□□ -0.73
CLDN4-203ENST00000435050 SEZ6L2Q6UXD5 910 aa10.52□□□□□ -0.73
CLDN4-203ENST00000435050 SLC51BQ86UW2 128 aa10.52□□□□□ -0.73
CLDN4-203ENST00000435050 ZNF75AQ96N20 296 aa10.52□□□□□ -0.73
CLDN4-203ENST00000435050 NUPL2O15504 423 aaKnown RBP10.52□□□□□ -0.73
CLDN4-203ENST00000435050 DUS4LO95620 317 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms