RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ATP6V1DQ9Y5K8 247 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 LY75O60449 1722 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 COL5A3P25940 1745 aaPredicted RBP3.72□□□□□ -1.81
USP54-206ENST00000433394 BTAF1O14981 1849 aa3.72□□□□□ -1.81
USP54-206ENST00000433394 ANKRD36CQ5JPF3 1778 aa3.71□□□□□ -1.81
USP54-206ENST00000433394 ARFGEF2Q9Y6D5 1785 aa3.71□□□□□ -1.81
USP54-206ENST00000433394 EP400Q96L91 3159 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 NUP188Q5SRE5 1749 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 IGHV7-4-1A0A0J9YVY3 117 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 H0YJW9 148 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 PSPHP1O15172 72 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 CD70P32970 193 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 TPM4P67936 248 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 MRPS15P82914 257 aaKnown RBP3.71□□□□□ -1.82
USP54-206ENST00000433394 SIGLEC14Q08ET2 396 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 EBI3Q14213 229 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 COX19Q49B96 90 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 C8orf74Q6P047 294 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 ERICH5Q6P6B1 374 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 COMTD1Q86VU5 262 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 H1FOOQ8IZA3 346 aaPredicted RBP3.71□□□□□ -1.82
USP54-206ENST00000433394 OR6K2Q8NGY2 324 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 OR13G1Q8NGZ3 307 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 OR51A7Q8NH64 312 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 ZNF461Q8TAF7 563 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 ERMNQ8TAM6 284 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 SFXN5Q8TD22 340 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 GHSRQ92847 366 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 MRPL48Q96GC5 212 aaKnown RBP3.71□□□□□ -1.82
USP54-206ENST00000433394 ARV1Q9H2C2 271 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 SIGLEC9Q9Y336 463 aa3.71□□□□□ -1.82
USP54-206ENST00000433394 TSSC4Q9Y5U2 329 aaPredicted RBP3.71□□□□□ -1.82
USP54-206ENST00000433394 TJP1Q07157 1748 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 AFDNP55196 1824 aaKnown RBP3.7□□□□□ -1.82
USP54-206ENST00000433394 TAF1LQ8IZX4 1826 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 MYH3P11055 1940 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 LOC100506127A0A0U1RQW1 187 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 ZNF879B4DU55 563 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 LINC01619G3V211 115 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 ALOX12BO75342 701 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 PTTG1O95997 202 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 OXTP01178 125 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 MMP7P09237 267 aaPredicted RBP3.7□□□□□ -1.82
USP54-206ENST00000433394 OR5AL1P0C617 328 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 ZNF32P17041 273 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 HADHBP55084 474 aaKnown RBP3.7□□□□□ -1.82
USP54-206ENST00000433394 DSTNP60981 165 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 TNNC1P63316 161 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 PITPNAQ00169 270 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 Q3ZCU0 254 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 STEAP4Q687X5 459 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 OR4M2Q8NGB6 313 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 SLC25A46Q96AG3 418 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 OR10C1Q96KK4 312 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 OR4K3Q96R72 315 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 CDX2Q99626 313 aaPredicted RBP3.7□□□□□ -1.82
USP54-206ENST00000433394 SPIN2AQ99865 258 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 SPIN2BQ9BPZ2 258 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 SAMD10Q9BYL1 202 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 HEBP1Q9NRV9 189 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 VAPAQ9P0L0 249 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 PRO0461Q9UI25 63 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 RFNGQ9Y644 331 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 GMEB1Q9Y692 573 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 ADCY9O60503 1353 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 NUP98P52948 1817 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 BRWD3Q6RI45 1802 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 IGSF9BQ9UPX0 1349 aa3.7□□□□□ -1.82
USP54-206ENST00000433394 IGHV3-49A0A0A0MS15 119 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 IGHV2OR16-5A0A0B4J2B6 119 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 ANKRD20A5PA0PJZ0 165 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 GOLGA6L19H0YKK7 550 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 M0R1X1 148 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 TCAPO15273 167 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 YKT6O15498 198 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 SERPINB7O75635 380 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 RPSAP08865 295 aaKnown RBP3.69□□□□□ -1.82
USP54-206ENST00000433394 BGNP21810 368 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 PRSS3P35030 304 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 UBE2E1P51965 193 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 RPL31P62899 125 aaKnown RBP3.69□□□□□ -1.82
USP54-206ENST00000433394 BASP1P80723 227 aaKnown RBP3.69□□□□□ -1.82
USP54-206ENST00000433394 DR1Q01658 176 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 INCA1Q0VD86 236 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 LAMTOR4Q0VGL1 99 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 MAPRE2Q15555 327 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 ABCA11PQ4W5N1 156 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 TEX30Q5JUR7 227 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 Q5W150 140 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 PDPK2PQ6A1A2 396 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 COPS6Q7L5N1 327 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 ZNF695Q8IW36 515 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 OR4M1Q8NGD0 313 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 NDNFQ8TB73 568 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 DOK4Q8TEW6 326 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 DDI1Q8WTU0 396 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 ANKRD7Q92527 254 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 KCNS1Q96KK3 526 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 UBE2E2Q96LR5 201 aa3.69□□□□□ -1.82
USP54-206ENST00000433394 ALS2CR12Q96Q35 445 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms