RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 C10orf35Q96D05 121 aa13.09□□□□□ -0.31
LINC00839-202ENST00000429940 ZNF799Q96GE5 643 aa13.09□□□□□ -0.31
LINC00839-202ENST00000429940 TAAR9Q96RI9 348 aa13.09□□□□□ -0.31
LINC00839-202ENST00000429940 METTL9Q9H1A3 318 aa13.09□□□□□ -0.31
LINC00839-202ENST00000429940 NXT1Q9UKK6 140 aaKnown RBP13.09□□□□□ -0.31
LINC00839-202ENST00000429940 UMAD1C9J7I0 102 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 FABP1P07148 127 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 ACKR3P25106 362 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 FXYD4P59646 89 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 FABP9Q0Z7S8 132 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 SNAI3Q3KNW1 292 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 C10orf128Q5T292 105 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 TSPO2Q5TGU0 170 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 PRAMEF20Q5VT98 475 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 SLC25A45Q8N413 288 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 TCEAL3Q969E4 200 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 NABP1Q96AH0 204 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 SPACA9Q96E40 222 aaPredicted RBP13.08□□□□□ -0.32
LINC00839-202ENST00000429940 ZNF251Q9BRH9 671 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 PCED1AQ9H1Q7 454 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 SH3BGRL3Q9H299 93 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 ZNF581Q9P0T4 197 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 LINC00587B1AMM8 73 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 SPRY1O43609 319 aaPredicted RBP13.08□□□□□ -0.32
LINC00839-202ENST00000429940 C1QL1O75973 258 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 RAB5AP20339 215 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 HOXA6P31267 233 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 OTX1P32242 354 aaPredicted RBP13.08□□□□□ -0.32
LINC00839-202ENST00000429940 SUCLG1P53597 346 aaKnown RBP13.08□□□□□ -0.32
LINC00839-202ENST00000429940 PHLDA2Q53GA4 152 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 GPR157Q5UAW9 335 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 LYSMD4Q5XG99 296 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 Q6ZSR3 168 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 WDR5BQ86VZ2 330 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 FADS6Q8N9I5 356 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 TMEM54Q969K7 222 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 GALNT14Q96FL9 552 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 OR6C1Q96RD1 312 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 RASL10BQ96S79 203 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 RBM24Q9BX46 236 aaKnown RBP13.08□□□□□ -0.32
LINC00839-202ENST00000429940 PLEK2Q9NYT0 353 aa13.08□□□□□ -0.32
LINC00839-202ENST00000429940 IGHV3-15A0A0B4J1V0 119 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 hCG_1809904A0A1W2PP81 198 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 FAM230AA0A1W2PPH8 454 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 A0A1W2PR64 198 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 A0A1W2PRV1 198 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 PATE3B3GLJ2 98 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 H7C1Q1 480 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 SCRG1O75711 98 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 GLI4P10075 376 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 DTYMKP23919 212 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 FKBP2P26885 142 aaKnown RBP13.07□□□□□ -0.32
LINC00839-202ENST00000429940 HIST1H3AP68431 136 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 HIST2H3PS2Q5TEC6 136 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 PMS2CLQ68D20 193 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 HIST2H3AQ71DI3 136 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 OR5L1Q8NGL2 311 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 CD300LFQ8TDQ1 290 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 SPTSSAQ969W0 71 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 SGK3Q96BR1 496 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 C18orf12Q96KH6 178 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 IER2Q9BTL4 223 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 SUCNR1Q9BXA5 334 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 METTL1Q9UBP6 276 aaKnown RBP13.07□□□□□ -0.32
LINC00839-202ENST00000429940 HSF4Q9ULV5 492 aa13.07□□□□□ -0.32
LINC00839-202ENST00000429940 STRAPQ9Y3F4 350 aaKnown RBP13.07□□□□□ -0.32
LINC00839-202ENST00000429940 DUSP1P28562 367 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 PMELP40967 661 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 RAB5CP51148 216 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 FBXW12Q6X9E4 464 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 LIAT1Q6ZQX7 453 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.06□□□□□ -0.32
LINC00839-202ENST00000429940 LRTM2Q8N967 370 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 HSD17B11Q8NBQ5 300 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 CCDC54Q8NEL0 328 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 OR52M1Q8NGK5 317 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 DYRK2Q92630 601 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 MARS2Q96GW9 593 aaKnown RBP13.06□□□□□ -0.32
LINC00839-202ENST00000429940 REEP6Q96HR9 211 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 ZNF385AQ96PM9 386 aaKnown RBP13.06□□□□□ -0.32
LINC00839-202ENST00000429940 PBDC1Q9BVG4 233 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 DEFB126Q9BYW3 111 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 SEBOXQ9HB31 216 aaPredicted RBP13.06□□□□□ -0.32
LINC00839-202ENST00000429940 KCNJ16Q9NPI9 418 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 NIT2Q9NQR4 276 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 GSN-AS1Q9NRJ2 163 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 ZDHHC8Q9ULC8 765 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 FBXO7Q9Y3I1 522 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 CACNA1HO95180 2353 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 CCDC163A0A0D9SF12 145 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 ARG1P05089 322 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 SULT1A1P50225 295 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 H3F3AP84243 136 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 NHLH2Q02577 135 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 IL13RA2Q14627 380 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 RHEBQ15382 184 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 FOXL2NBQ6ZUU3 175 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 C20orf196Q8IYI0 205 aa13.06□□□□□ -0.32
LINC00839-202ENST00000429940 FAM24BQ8N5W8 94 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms