RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 C1orf147Q96MC9 270 aaPredicted RBP7.27□□□□□ -1.25
CD44-208ENST00000428726 ZNF2Q9BSG1 426 aaPredicted RBP7.27□□□□□ -1.25
CD44-208ENST00000428726 TREM1Q9NP99 234 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 TREM2Q9NZC2 230 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 PCDHB10Q9UN67 800 aa7.27□□□□□ -1.25
CD44-208ENST00000428726 SPG11Q96JI7 2443 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 KANTRA0A1W2PQU2 76 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR14I1A6ND48 311 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 PTGER4P35408 488 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 GSK3AP49840 483 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 SNTB1Q13884 538 aaKnown RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 CHRFAM7AQ494W8 412 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR56B2PQ8NGI1 322 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR5H2Q8NGV7 314 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR2V1Q8NHB1 315 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 IL1F10Q8WWZ1 152 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 BORCS8Q96FH0 119 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 SULT4A1Q9BR01 284 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 NUDT16L1Q9BRJ7 211 aaKnown RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 ZNF442Q9H7R0 627 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 MYOZ1Q9NP98 299 aaPredicted RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 FBLN5Q9UBX5 448 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 AUP1Q9Y679 476 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 CENPEQ02224 2701 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 TEX13DA0A0J9YY54 714 aaPredicted RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 C19orf67A6NJJ6 358 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 HMSDA8MTL9 139 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 EIF1BO60739 113 aaKnown RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 HIST1H1DP16402 221 aaKnown RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 CTRB1P17538 263 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 HAAOP46952 286 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 CEBPDP49716 269 aaPredicted RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 RPS16P62249 146 aaKnown RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 PPIAP62937 165 aaKnown RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 GRB2P62993 217 aaKnown RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 PLEKHN1Q494U1 663 aaPredicted RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 IGSF11Q5DX21 431 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 CTRB2Q6GPI1 263 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR2T2Q6IF00 324 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 CRIP3Q6Q6R5 217 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 PGAP1Q75T13 922 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR2W3Q7Z3T1 314 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 IQCF2Q8IXL9 164 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 ZNF100Q8IYN0 542 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR2M7Q8NG81 312 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR13G1Q8NGZ3 307 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 DCUN1D4Q92564 292 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 OR10C1Q96KK4 312 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 NAA11Q9BSU3 229 aaPredicted RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 TTTY12Q9BZ98 90 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 STRADBQ9C0K7 418 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 C5orf66Q9H5L9 145 aa7.26□□□□□ -1.25
CD44-208ENST00000428726 FBXO9Q9UK97 447 aaPredicted RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 LSM5Q9Y4Y9 91 aaKnown RBP7.26□□□□□ -1.25
CD44-208ENST00000428726 C9orf170A2RU37 121 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 MSTNO14793 375 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 VAMP5O95183 116 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 RD3LP0DJH9 198 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 LSM6P62312 80 aaKnown RBP7.25□□□□□ -1.25
CD44-208ENST00000428726 QRFPP83859 136 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 FOXO1Q12778 655 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 ANKRD55Q3KP44 614 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 NSUN5P2Q63ZY6 315 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 FAM122CQ6P4D5 195 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 P4HA3Q7Z4N8 544 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 SEMA6DQ8NFY4 1073 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 OR56B1Q8NGI3 324 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 OR1F12Q8NHA8 337 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 PRRT1Q99946 306 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 C20orf24Q9BUV8 137 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 OR5AC2Q9NZP5 309 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 KIF25Q9UIL4 384 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 ST3GAL6Q9Y274 331 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 STARD10Q9Y365 291 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 ZNF716A6NP11 495 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 NRASP01111 189 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 RCC1P18754 421 aaPredicted RBP7.25□□□□□ -1.25
CD44-208ENST00000428726 CCL1P22362 96 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 OMGP23515 440 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 CASRP41180 1078 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 MEOX1P50221 254 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 IDH3GP51553 393 aaPredicted RBP7.25□□□□□ -1.25
CD44-208ENST00000428726 RAC3P60763 192 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 RAB1AP62820 205 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 LTC4SQ16873 150 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 SPIN3Q5JUX0 258 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 DOK3Q7L591 496 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 MCEMP1Q8IX19 187 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
CD44-208ENST00000428726 CMSS1Q9BQ75 279 aaKnown RBP7.25□□□□□ -1.25
CD44-208ENST00000428726 WNT5BQ9H1J7 359 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 PCDHB16Q9NRJ7 776 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 MLXQ9UH92 298 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 TUBAL3A6NHL2 446 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 TMEM14DPA8MWL7 114 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 A8MXK9 166 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 F8W036 122 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 EFSO43281 561 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 SYNGR1O43759 233 aa7.25□□□□□ -1.25
CD44-208ENST00000428726 DHRS3O75911 302 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms