RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ODF4Q2M2E3 257 aa13.29□□□□□ -0.28
VARS-216ENST00000428445 ZNF626Q68DY1 528 aa13.29□□□□□ -0.28
VARS-216ENST00000428445 BAIAP2L2Q6UXY1 529 aa13.29□□□□□ -0.28
VARS-216ENST00000428445 Q6ZSR3 168 aa13.29□□□□□ -0.28
VARS-216ENST00000428445 OR13D1Q8NGV5 346 aa13.29□□□□□ -0.28
VARS-216ENST00000428445 H2AFY2Q9P0M6 372 aaPredicted RBP13.29□□□□□ -0.28
VARS-216ENST00000428445 TBL2Q9Y4P3 447 aaKnown RBP13.29□□□□□ -0.28
VARS-216ENST00000428445 V9GYS6 101 aa13.29□□□□□ -0.28
VARS-216ENST00000428445 TMEM82A0PJX8 343 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 LOC110117498-PIK3R3F6TDL0 507 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 PRKYO43930 277 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 ZNF737O75373 536 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 CALCBP10092 127 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 CD33P20138 364 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 VDAC2P45880 294 aaPredicted RBP13.28□□□□□ -0.28
VARS-216ENST00000428445 CXCR4P61073 352 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 SLC34A1Q06495 639 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 EDDM3AQ14507 147 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 TCTEX1D4Q5JR98 221 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 C11orf87Q6NUJ2 197 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 ELMOD2Q8IZ81 293 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 OR5AU1Q8NGC0 362 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 OR11H6Q8NGC7 330 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 SLAMF9Q96A28 289 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 OCSTAMPQ9BR26 566 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 MTCH1Q9NZJ7 389 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 IL36RNQ9UBH0 155 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 OR52A1Q9UKL2 312 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 COL7A1Q02388 2944 aa13.28□□□□□ -0.28
VARS-216ENST00000428445 KIAA2026Q5HYC2 2103 aa13.27□□□□□ -0.28
VARS-216ENST00000428445 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 SH2D7A6NKC9 451 aaPredicted RBP13.27□□□□□ -0.29
VARS-216ENST00000428445 K7EIL1 84 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 MMP23AO75900 390 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 RBP4P02753 201 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 MPZP25189 248 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 ACTA2P62736 377 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 ACTG2P63267 376 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 ACTC1P68032 377 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 ACTA1P68133 377 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 CBX1P83916 185 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 EFNB1P98172 346 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 PTGES3Q15185 160 aaKnown RBP13.27□□□□□ -0.29
VARS-216ENST00000428445 BCL2L15Q5TBC7 163 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 ZNF322Q6U7Q0 402 aaPredicted RBP13.27□□□□□ -0.29
VARS-216ENST00000428445 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 MEPCEQ7L2J0 689 aaKnown RBP13.27□□□□□ -0.29
VARS-216ENST00000428445 CCDC54Q8NEL0 328 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 OR52N4Q8NGI2 321 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 CNN2Q99439 309 aaKnown RBP13.27□□□□□ -0.29
VARS-216ENST00000428445 CADM1Q9BY67 442 aaKnown RBP13.27□□□□□ -0.29
VARS-216ENST00000428445 CHST6Q9GZX3 395 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 SEBOXQ9HB31 216 aaPredicted RBP13.27□□□□□ -0.29
VARS-216ENST00000428445 PAPOLBQ9NRJ5 636 aaKnown RBP13.27□□□□□ -0.29
VARS-216ENST00000428445 SNX5Q9Y5X3 404 aa13.27□□□□□ -0.29
VARS-216ENST00000428445 TCRBV3S1A0A5B6 114 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 F2RL2O00254 374 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 RPP14O95059 124 aaKnown RBP13.26□□□□□ -0.29
VARS-216ENST00000428445 IGHA1P01876 353 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 CHRM2P08172 466 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 DUSP1P28562 367 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 OR12D2P58182 307 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 KRTAP10-11P60412 298 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 CD83Q01151 205 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 IL24Q13007 206 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 FLOT2Q14254 428 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 UBE2V2Q15819 145 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 DNAL1Q4LDG9 190 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 FAHD1Q6P587 224 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 CCDC121Q6ZUS5 278 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 GDPD3Q7L5L3 318 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 SSX6Q7RTT6 188 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 SPATA24Q86W54 205 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 SLC35F2Q8IXU6 374 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 WFDC9Q8NEX5 89 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 FOXRED1Q96CU9 486 aaPredicted RBP13.26□□□□□ -0.29
VARS-216ENST00000428445 ZNF714Q96N38 554 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 PKIBQ9C010 78 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 MRM2Q9UI43 246 aaKnown RBP13.26□□□□□ -0.29
VARS-216ENST00000428445 PITPNC1Q9UKF7 332 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 R4GMQ9 66 aa13.26□□□□□ -0.29
VARS-216ENST00000428445 RYR3Q15413 4870 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 H3BUI4 141 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 GYG2O15488 501 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 FKBP6O75344 327 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 DAPP51397 102 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 SNU13P55769 128 aaKnown RBP13.25□□□□□ -0.29
VARS-216ENST00000428445 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 ZNF676Q8N7Q3 588 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 NDNFQ8TB73 568 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 TBX5Q99593 518 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 CLN6Q9NWW5 311 aa13.25□□□□□ -0.29
VARS-216ENST00000428445 IGHV2-26A0A0B4J1V2 119 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 WI2-2373I1.2A0A1W2PRP0 233 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 FAM172BPA6NC97 362 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 ZNF670-ZNF695F2Z2N8 137 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 MITFO75030 526 aaPredicted RBP13.24□□□□□ -0.29
VARS-216ENST00000428445 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 CCL1P22362 96 aa13.24□□□□□ -0.29
VARS-216ENST00000428445 EPHA2P29317 976 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms